DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PGRP-SB2 and pglyrp2

DIOPT Version :10

Sequence 1:NP_001261970.1 Gene:PGRP-SB2 / 39869 FlyBaseID:FBgn0043577 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001106487.2 Gene:pglyrp2 / 100127677 XenbaseID:XB-GENE-5779913 Length:497 Species:Xenopus tropicalis


Alignment Length:167 Identity:48/167 - (28%)
Similarity:77/167 - (46%) Gaps:29/167 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IVPRSSWCPVPISPRMPRLMVPVRLIIIHHTV--TAPCFNPHQCQLVLRQIRADHMR-RKFRDIG 80
            ::||..|.......:...|.:|:..:.||||.  :.||.:..||...:|.::..|.: |.:.|||
 Frog   331 VIPRCMWGAKRYKGKPIFLGLPLSRVFIHHTYEPSQPCTSFSQCAANMRSMQRFHQQDRGWDDIG 395

  Fly    81 YNFLIGGDGRIYEGLGFGIRGEHAPRYNSQSIGIAFIGNFQNAPGCPNPHPN----------RCA 135
            |:|::|.:|.:|||.|:...|.|...|||...|::|||::.:..    |..:          |||
 Frog   396 YSFVVGSNGYLYEGRGWNRAGAHTRGYNSVGYGVSFIGDYTSIV----PKDSILALVKDRFLRCA 456

  Fly   136 ASPGFAQLFRGGSLPN---EGH--CLSGNTPSQRAQK 167
            ...|:.       .||   :||  .:|.:.|.....|
 Frog   457 VRLGYI-------TPNYIIQGHRQVVSTSCPGDALYK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SB2NP_001261970.1 PGRP 18..>129 CDD:128941 36/112 (32%)
pglyrp2NP_001106487.2 PGRP 329..474 CDD:128941 45/153 (29%)

Return to query results.
Submit another query.