DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dab and c8b

DIOPT Version :9

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:NP_001243652.1 Gene:c8b / 793127 ZFINID:ZDB-GENE-070912-163 Length:562 Species:Danio rerio


Alignment Length:415 Identity:81/415 - (19%)
Similarity:135/415 - (32%) Gaps:131/415 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 STFGG----GSGAAEETNYAKHRNDPGRF-----FGDGVQFKAKLIG--ILEVGEARGDRMCQEA 73
            |.|||    .:|..||:     ...|.||     |.....|:..:.|  :||.....||..|.:.
Zfish    62 SEFGGEPCQNNGREEES-----CTPPARFSCQKSFAICQGFRCTVTGRCVLENLRCNGDDDCGDG 121

  Fly    74 L--QDLKMAIRAAGE-HKQRITIHVTIDGLRLRDEKTG----DSLYH------HPVHKI----SF 121
            .  ||.|...:|..: .::...|.....|..:.:.|..    |:.|:      |.:..:    .|
Zfish   122 SDEQDCKKVYKACNQPTEEYYGIENLAKGFNILNGKMEAVVLDNRYYAGGCLPHFIQDVRFRKPF 186

  Fly   122 IAQDMTDSRAFGYIFGSP--DSGHRFFGIKT----DKAASQVVLAMRDLFQVVF---------EL 171
            ..|..|......|.|...  ||...:|..::    .|.:..:.:|..:.|...|         .:
Zfish   187 NLQQYTIETKGSYDFNMKEYDSYSEYFKSESHSTLSKTSVSIGIAYPNAFDFSFAYNDHKYKRSV 251

  Fly   172 KK---------------KEIEMARQQIQGKSLHDHSSQLASLSSL-------------------- 201
            ||               .|:|:||..::.::|..|...::.|::|                    
Zfish   252 KKMRTYSGTKNKFIRAHSELEVARYALKPQNLMLHPEFVSRLNALPLEYSYGEYRQIYQDYGTHF 316

  Fly   202 -KSSGLGGMGLGHSDLASGGISSGHALTLLGSSLSTTNGTSRLGVSLDV---------------- 249
             |.:.|||      :.....|.:.......|.||..|....::|:.:.|                
Zfish   317 IKEATLGG------EFEYTVILNDEKFEKSGYSLDETKNCVQVGLKVGVQVKKIYVGLGLSGGSC 375

  Fly   250 ---AKASGSAAKEVSPESVADLVDLEQELTSLQRGISQ-MERITPNE-PTTSSTGGAGHPSLAKS 309
               .|..|.:.||      .|:|  |.....::.|.|: :.|:...: ||         |.:.:.
Zfish   376 EGLLKEIGDSTKE------RDMV--EDVFIVVKGGDSETVSRLAAKQLPT---------PDIMQM 423

  Fly   310 ASEDDPFGDSFI---YVPSYSILPP 331
            ..|...:...||   ..|.|.::||
Zfish   424 WGEAVFYNPEFISKKIEPIYELVPP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 38/199 (19%)
c8bNP_001243652.1 TSP1 37..83 CDD:214559 7/25 (28%)
MACPF 238..467 CDD:280069 42/234 (18%)
TSP1 <532..561 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3535
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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