DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dab and dab1b

DIOPT Version :9

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:XP_005171167.1 Gene:dab1b / 678641 ZFINID:ZDB-GENE-060421-7958 Length:520 Species:Danio rerio


Alignment Length:684 Identity:165/684 - (24%)
Similarity:249/684 - (36%) Gaps:229/684 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RFFGDGVQFKAKLIGILEVGEARGDRMCQEALQDLK---MAIRAAGEHKQRITIHVTIDGLRLRD 104
            |:.|||:::|||||||.:|...|||::||:::..||   .:.|:.|:|||||.:.|:..|:::.|
Zfish    43 RYRGDGIRYKAKLIGIDDVTATRGDKLCQDSMMKLKGIAASARSKGKHKQRIFLTVSFGGIKIYD 107

  Fly   105 EKTGDSLYHHPVHKISFIAQDMTDSRAFGYIFGSPDSGHRFFGIKTDKAASQVVLAMRDLFQVVF 169
            |::|...:||.||:||:||:|..|.|||||:.|. ...|:|..|||..||:.|:|.:||||.::.
Zfish   108 ERSGVLQHHHSVHEISYIAKDSRDHRAFGYVCGK-KGNHKFVAIKTSHAAAPVILDLRDLFTLIH 171

  Fly   170 ELKKKEIEMARQQIQGKSLHD-HSSQLASLSSLKSSGLGGM------GLGHSDLASGGISSGHAL 227
            ::|:      |::.:.||..: |..|:...:.|:......:      ..||..|      .||. 
Zfish   172 DIKQ------REEAEKKSQKEKHCEQVIYQTILEDEVDDPVYQYIVFEAGHEPL------HGHQ- 223

  Fly   228 TLLGSSLSTTNGTSRLGVSLDVAKASGSAAKEVSPESVADLVDLEQELTSLQR-GISQMERITPN 291
                                             |.|||      .|..||.|: ||..:.:    
Zfish   224 ---------------------------------SEESV------YQVPTSQQKDGIYDVPK---- 245

  Fly   292 EPTTSSTGGAGHPSLAKSASEDDPFGDSFIYVPSYSILPPPP----DSGRNRHKPPNKTPDAVTS 352
                       |..:| :.|:.|.||| ....|....:|..|    |.||.|.   ...|:..|.
Zfish   246 -----------HHLMA-NISQVDLFGD-MATPPDILSMPASPATTLDPGRRRR---FVRPELFTH 294

  Fly   353 LDAMLSPPPGTSSSHGSASAGLQAADNDDDNWLQELDQQNDVFDTSKVVSSSGLGSVLAMAPLAS 417
            ..     ||...:.:.:..| ||||     :|..:                        ..|:|.
Zfish   295 FS-----PPAVPTGYMTMGA-LQAA-----HWTPQ------------------------ATPMAF 324

  Fly   418 SESTATPTQQLTEVAAGSGPL--ADLDIGLSTALGNEEQTSTILSLDAFTDLDPLGTGRTRPYVD 480
            ...|..   .:.::..|..|:  ...::..|.|.|.::.        ||.....:|.| |.|   
Zfish   325 GVQTPL---HMAQMLPGGQPVIWGQANLFHSPATGQQQW--------AFVPAQAVGLG-THP--- 374

  Fly   481 KKYFFQELKNPPKKLLKELSSGSQAGLGLGLSLGQLDGLFPEDSTTISTTTTTATNITAGNPQQN 545
                                          :|...|.||.|..|....:.          .|.:.
Zfish   375 ------------------------------ISAAVLQGLIPLASMRPQSC----------EPPET 399

  Fly   546 SANTLTSTASTAASLGQLLSTVALNPDPLPAPISIPTSIS--HSITPSAEL--KLLLGHVTNPPN 606
            |:|.: |......|.|   |..|:|.||....|:....|:  .:|.||.:.  :|.|..:|    
Zfish   400 SSNFM-SPQHLVDSRG---SEHAINTDPHEEVITAEICINKQDTIEPSVDSCEELDLSQMT---- 456

  Fly   607 PTGHYYTTEPPTLNSLENPHPPADPVLLPRDTDPFSPTRKKSDPDPFQESDLFAKLDAFEFEAPP 671
                ..||||.|                     ..|.|...:.|||  |....|...:.|.....
Zfish   457 ----LQTTEPST---------------------SASATDSCATPDP--EKQTTADATSVEELQDS 494

  Fly   672 AVPAPSIPNLATETKANVFNGPLQVQLPPEKELQ 705
            :|..|.:...|.:.:.|          ||:...|
Zfish   495 SVSVPEVLEKAADAQIN----------PPDSSQQ 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 61/140 (44%)
dab1bXP_005171167.1 PTB_Dab 34..182 CDD:269926 62/145 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574067
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002247
OrthoInspector 1 1.000 - - otm25692
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11232
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.940

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