DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dab and ldlrap1

DIOPT Version :10

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:NP_001017114.1 Gene:ldlrap1 / 549868 XenbaseID:XB-GENE-954261 Length:309 Species:Xenopus tropicalis


Alignment Length:285 Identity:66/285 - (23%)
Similarity:113/285 - (39%) Gaps:54/285 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TFGGGSGAAEETNYAKHRNDPGRFFG------DGVQFKAKLIGILEVGEARGDRMCQEALQDLKM 79
            ::|||          ||:..|..:..      :|:.|..|.:|:..|.:.:|:.:...|::.:..
 Frog    21 SWGGG----------KHKKLPENWTDTRETLLEGMSFHLKYLGMTLVEQPKGEELSATAVKRIVA 75

  Fly    80 AIRAAGEHKQRITIHVTIDGLRLRDEKTGDSLYHHPVHKISFIAQDMTDSRAFGYIFGSPDSG-- 142
            ..:|:|:..|::.:.|:..|:.|.|..:...:.:..:::||:...|....:.|.||..|..:.  
 Frog    76 TAKASGKKLQKVILKVSPRGIILYDLASNQLIENVSIYRISYCTADKMHDKVFAYIAQSQQNETL 140

  Fly   143 --HRFFGIKTDKAASQVVLAMRDLFQVVFEL------KKKEIEMARQQIQGKSLHDHSSQLASLS 199
              |.|...|. |.|..|.|.:...|:|.||.      .|::.|.:....:|.| ...|...:|::
 Frog   141 ECHAFLCTKR-KMAQAVTLTVAQAFKVAFEFWQVSRENKEKREKSGSDGEGAS-SSQSDGSSSIT 203

  Fly   200 SLKSSGLGGMGLGHSDLASG----GISSGHALTLLGSSLSTTNGT-------------SRLGVS- 246
            |||:|....: |...|.|..    ..|..|...|...:.|..|..             |||..| 
 Frog   204 SLKASASANL-LDLEDCAKAFDALNASDNHIEDLFRQNESNENNNIVWALDDGLDEAFSRLAESR 267

  Fly   247 -----LDVAKASGSAAKE--VSPES 264
                 ||:...:.....|  :||.|
 Frog   268 TNPQVLDIGLTANDLQSEECLSPSS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 37/161 (23%)
PRK12727 542..>708 CDD:237182
ldlrap1NP_001017114.1 PTB_LDLRAP-mammal-like 43..165 CDD:269981 28/122 (23%)
Blue background indicates that the domain is not in the aligned region.

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