DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dab and numbl

DIOPT Version :9

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:XP_005173435.1 Gene:numbl / 497616 ZFINID:ZDB-GENE-051113-340 Length:640 Species:Danio rerio


Alignment Length:693 Identity:149/693 - (21%)
Similarity:230/693 - (33%) Gaps:213/693 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 FKAKLIGILEVGEARGDRMCQEALQDLKMAIRAAGEHKQRITIHVTIDGLRLRDEKTGDSLYHHP 115
            |..:.:|::||.|:||..:|:||::.||:    :|:...:..:.|:.||||:.|:||.|.:....
Zfish    61 FPVRYLGLVEVDESRGMHVCEEAVKKLKV----SGKKTVKAVLWVSADGLRVVDDKTKDLIVDQT 121

  Fly   116 VHKISFIAQDMTDSRAFGYI--------------FGSPDSGHRF--------------------- 145
            :.|:||.|.|....:||.||              ....|||.|.                     
Zfish   122 IEKVSFCAPDRNYDKAFSYICRDGTTRRWMCHCFMALKDSGERLSHAVGCAFAACLERKQRREKE 186

  Fly   146 FGIKTDKAASQVVLAMRDLFQVVFELKKKEIEMARQQIQGKSLHDHSSQLASLSSL---KSSGLG 207
            .|:.....||:........|:|....::.:.|...:|||     |...::..:|:|   .:|...
Zfish   187 CGVTASFDASRTSFVREGSFRVSSAAQQSDREDIMKQIQ-----DKKKEMCGISALPPGNASPPE 246

  Fly   208 GMGLGHSDLASGG---ISSGHA----LTLLGS-----SLSTTNGTSRLGVSLDVAKASGSAAKEV 260
            |.|........||   |...||    |...||     .||..|...:..:||.:.....:..::.
Zfish   247 GAGSPGERAEPGGPHAIPRRHAPIEQLVRQGSFRGFPQLSQKNSPFKRQLSLRLNDLPSTLQRKT 311

  Fly   261 -----SPESVADLVDLEQELTSLQRGISQMER--ITPNEPTTSSTGGAGHP-SLAKSASEDDPFG 317
                 :|....||. :..|..|:....||:..  ..|:|...:.|.....| |.|..|       
Zfish   312 DFQTKNPVPEMDLT-VAGEADSINALCSQINSSFTKPSEDLCAKTTNNCLPISCAPPA------- 368

  Fly   318 DSFIYVPSYSILPPPPDSGRNRHKPPNKTPDAVTSLDAMLSPPPGTSSSHGSASAGLQAADNDDD 382
                       :||||            .|...|:|...:.||  ..||......|.:...::.:
Zfish   369 -----------IPPPP------------APPQATNLWVQIEPP--VQSSPPIPQGGHKRTPSEAE 408

  Fly   383 NWLQELDQQNDVFDTSKVVSSSGLGSVLAMAPLASSESTATPTQQ-----LTEVAAGSGPLADLD 442
            .||:|:         :|.|.|..........|         ||||     ...:|.||.|.:...
Zfish   409 RWLEEV---------AKAVKSQQQTPPTLPPP---------PTQQPPPVPTMPIAPGSLPTSMQP 455

  Fly   443 IGLSTALGNEEQTSTILSLDAFTDLDPLGTGRTRPYVDKKYFFQELKN--------------PPK 493
            ..::.     :.|...:|:.....|.|       .:|..:.:...|.|              .|.
Zfish   456 FPMAF-----DVTPAPVSMFTQQPLQP-------AFVPMQPYMPTLANSMTYPNASVPVVGITPS 508

  Fly   494 KLLKEL-------SSGSQAGLGLGLSLGQLDG----LFPEDSTTISTTTTTATNITAGNPQQNSA 547
            :::..:       ..|...|:|:|...|.|.|    .||.....:.|||..:.....|:||.:..
Zfish   509 QMVANVFCSAAGTGGGVAIGVGMGPKTGTLGGSQHSAFPTLPGGLPTTTFASPPTINGHPQNSFP 573

  Fly   548 NTLTSTA--STAASLGQLLSTVALNPDPLPAPISIPTSISHSITPSAELKLLLGHVTNPPNPTGH 610
            :|.||..  .||...|.                                    |.....||    
Zfish   574 STTTSVTQNGTAVKGGS------------------------------------GWPMENPN---- 598

  Fly   611 YYTTEPPTLNSLENPHPPADPVLL-----PRDTDPFSPTRKKS 648
                  ||:||.|..|..|....|     |:..:|||...:|:
Zfish   599 ------PTINSKEAEHFDAKWAALESKSQPKAQNPFSNDLQKT 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 41/164 (25%)
numblXP_005173435.1 PTB_Numb 45..179 CDD:241298 35/121 (29%)
NumbF 260..344 CDD:283874 18/84 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574045
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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