DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dab and ced-6

DIOPT Version :9

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:NP_001246225.1 Gene:ced-6 / 35971 FlyBaseID:FBgn0029092 Length:533 Species:Drosophila melanogaster


Alignment Length:531 Identity:109/531 - (20%)
Similarity:193/531 - (36%) Gaps:145/531 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 STFGGGSG------AAEETNYAKHR--NDPGRFFGDGVQFKAKLIGILEVGEARGDRMCQEAL-- 74
            :|.|||:|      |..|....|..  :.|.:.......:..|..|.|.|.:.:|..:.:||:  
  Fly    66 NTSGGGTGSNSNGDAKSEAKNGKRNWLHTPEQLISGHAVYLVKFFGNLSVDQPKGIEVVKEAIRK 130

  Fly    75 ----QDLKMAIRAAGEHKQRITIHVTIDGLRLRDEKTGDSLYHHPVHKISFIA------------ 123
                |.:|.|.....|..:::.|.::|.|:.:::.:|...|:..|::.||:.|            
  Fly   131 LQFAQQMKKAETGTQEKFKKLEITISIKGVAIQEPRTHKILHQFPLYNISYCADEKGVKKFFSFI 195

  Fly   124 ------QDMTDSRAFGYIFGSPD------SGHRFFGIKTDKAASQVVLAMRDLFQVVF-----EL 171
                  ||.:|..:.|:..|:.|      ..|..|...::|.||.:.|.:...|.:.:     ..
  Fly   196 AKTVKTQDGSDPTSNGHANGNGDGSAKVEESHECFVFISNKLASDITLTIGQAFDLAYRKYMDST 260

  Fly   172 KKKEIEMARQQIQ--GKSLHDHSSQLASLSS-LKSSGLGGM--GLGHSDL--------------A 217
            :|..:..|:|||.  .::::.:..:|..:|: |..:.|..:  .||..|:              |
  Fly   261 EKTNLSKAQQQINHLQQTVNVYKERLREVSAKLPKAELDALLFNLGIKDILEAPTTEPQNGIEVA 325

  Fly   218 SGGISSGHA--LTLLGSSLSTTNGTSRLGVS--LDVAKASGSAAKEVSPESVADLVDLEQELTSL 278
            |..:|:|..  ..||..:.|||..|.....|  |.:.....:.:.::|....::    .|::..|
  Fly   326 SEALSNGKLDDDKLLIDTNSTTASTHSASPSSFLPIVPPRNNLSSQISIGGKSN----SQKMDEL 386

  Fly   279 QRGISQMERITPNEPTTSSTGGAGHPSLAKSASEDDPFGDSFIYVPSYSILPPPPDSGRNRHKPP 343
            ...........|....|...||.|..:::      :.||                      .:|.
  Fly   387 LLNSDSDSDFDPRADETQEIGGTGRSAIS------NMFG----------------------FEPA 423

  Fly   344 NKTPDAVTSLDAMLSPPPGTSSSHGSASAGLQAADNDDDNWLQELDQQNDVFDTSKVVSSSGLGS 408
            |                          |.|.....|::|:.||..:....:...:..::|||..|
  Fly   424 N--------------------------SFGQHLFSNNNDHKLQNNNSSLLITSNNNSINSSGFSS 462

  Fly   409 VLAMAP--LASSESTATPTQQLTEVAAGSGPLADLDI----------GLSTALGNEEQTSTILSL 461
            .|.:.|  ||.....|.| ::|..|..|:|...:.|:          |.:....|:      |:|
  Fly   463 ELNITPPLLAPPPKIAAP-RRLNSVTTGNGLNGNTDLFGSDPFELNNGPNIFKQNQ------LNL 520

  Fly   462 DAFT--DLDPL 470
            |.|:  .||||
  Fly   521 DDFSLESLDPL 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 37/182 (20%)
ced-6NP_001246225.1 PTB_CED-6 92..261 CDD:269971 34/168 (20%)
AceK 233..>304 CDD:295079 14/70 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438633
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11232
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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