DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dab and numb

DIOPT Version :9

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:NP_001260291.1 Gene:numb / 34263 FlyBaseID:FBgn0002973 Length:556 Species:Drosophila melanogaster


Alignment Length:598 Identity:134/598 - (22%)
Similarity:201/598 - (33%) Gaps:184/598 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 FKAKLIGILEVGEARGDRMCQEALQDLKMAIRAAGEHKQRITIHVTIDGLRLRDEKTGDSLYHHP 115
            |..|.:|.:||.|:||.::|:|||:.|:.:.|    ...|..:||:.||||:.|::|...:....
  Fly    83 FSVKYLGCVEVFESRGMQVCEEALKVLRQSRR----RPVRGLLHVSGDGLRVVDDETKGLIVDQT 143

  Fly   116 VHKISFIAQDMTDSRAFGYIFGSPDSG----HRFFGIKTDKAASQVVLAMRDLFQVVFELKKKEI 176
            :.|:||.|.|....|.|.||.....:.    |.|...|  .:..::..|:...|.|..|.|::  
  Fly   144 IEKVSFCAPDRNHERGFSYICRDGTTRRWMCHGFLACK--DSGERLSHAVGCAFAVCLERKQR-- 204

  Fly   177 EMARQQIQGKSLHDHSSQLASLSSLKSSGLGGMGLGHSDLASGGISSGHALTLLGSSLSTTNGTS 241
                        .|....:......|:|.....|            |....||.......|.||:
  Fly   205 ------------RDKECGVTMTFDTKNSTFTRTG------------SFRQQTLTERLAMATVGTN 245

  Fly   242 RLGVSLDVAKASGSAAKEVSPESVADLVDLEQELTSLQRGISQMERITPN--EPTTS---STGGA 301
            ...|....:...|..|..|.|.:...:               :....|||  |..:|   ||.|:
  Fly   246 ERSVDGPGSAMPGPPAATVKPFNPFAI---------------ERPHATPNMLERQSSFRLSTIGS 295

  Fly   302 GHPSLAKSASEDDPFGDSFIYVPSYSILPPPPDSGRNR------HKPPNKTPDAVTSLDAMLSPP 360
            ..|               |....|..|...|.::.|.|      ...|.:||  :.|:..:....
  Fly   296 QSP---------------FKRQMSLRINDLPSNADRQRAFLTAAAGNPMQTP--LRSVSPIAEVS 343

  Fly   361 PGTSSSHGSASAGLQAADNDDDNWLQELDQ------QNDV---------FDTSKVVSSSGLGSVL 410
            |..|:.....||...|||: .....|||.|      |.|.         |:.::.::.:   .:.
  Fly   344 PAKSAGADPLSAAAVAADS-VSQLCQELSQGLSLLTQTDALLAAGEDLNFNNNRSINQN---IIA 404

  Fly   411 AMAPLASSESTATPTQQLTEVAAGSGPL-----------ADLDIGLSTALGNEEQTSTILSLDAF 464
            |...:....|.|.||.|:|...|.:.|.           ::..|..||.|.|.||.         
  Fly   405 AEKQVQHVHSYAPPTAQVTPRVASTTPTYQTLHSQSPSRSEQSIETSTELPNAEQW--------- 460

  Fly   465 TDLDPLG--TGRTRPYVDKKYFFQELKNPPKKLLKELSSGSQAGLGLGLSLGQLDGLFPEDSTTI 527
                 ||  ...|.|...|:..:  |.|..:  .:.|:||:.|.:|.|   |..|   |.|:..:
  Fly   461 -----LGHVVRSTSPAAPKRPTY--LANVGR--AQTLASGTGAAVGGG---GPDD---PFDAEWV 510

  Fly   528 STTTTTATNITAGNPQQNSANTLTSTASTAASLGQLLSTVALNPD-PLPAPISIPTSISHSITPS 591
            :       |:.|..                          .|:|| |:|:....|          
  Fly   511 A-------NVAAAK--------------------------QLSPDLPIPSTARSP---------- 532

  Fly   592 AELKLLLGHVTNP 604
                 |..|.|||
  Fly   533 -----LARHSTNP 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 40/133 (30%)
numbNP_001260291.1 PTB_Numb 67..201 CDD:241298 38/123 (31%)
NumbF 269..374 CDD:283874 30/137 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438632
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11232
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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