DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dab and Numbl

DIOPT Version :9

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:XP_006228627.1 Gene:Numbl / 292732 RGDID:1307579 Length:641 Species:Rattus norvegicus


Alignment Length:724 Identity:150/724 - (20%)
Similarity:221/724 - (30%) Gaps:275/724 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 FKAKLIGILEVGEARGDRMCQEALQDLKMAIRAAGEHKQRITIHVTIDGLRLRDEKTGDSLYHHP 115
            |..:.:|.:||.|:||..:|::|::.||    |.|....:..:.|:.||||:.|:||.|.|....
  Rat   107 FPVRYLGHVEVEESRGMHVCEDAVKKLK----AMGRKSVKSVLWVSADGLRVVDDKTKDLLVDQT 167

  Fly   116 VHKISFIAQDMTDSRAFGYIFGSPDSG----HRFFGIKTDKAASQVVLAMRDLFQVVFELKKKEI 176
            :.|:||.|.|....:||.||.....:.    |.|..:|  .:..::..|:...|....|      
  Rat   168 IEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALK--DSGERLSHAVGCAFAACLE------ 224

  Fly   177 EMARQQIQGKSLHDHSSQLASLSSLKSSGLGGMGLGHSDLASGGISSGHALTLLGSSLSTTNGTS 241
               |:|.:.|.....::..||.:|....|        |...|||          |.......|  
  Rat   225 ---RKQRREKECGVTAAFDASRTSFAREG--------SFRLSGG----------GRPAEREAG-- 266

  Fly   242 RLGVSLDVAKASGSAAKEVSPESVADLVDLEQELTSLQRGISQMERITPNEPTTS--STGGAGHP 304
                  |..||..:||..|:|                  |.:|...::|...|||  ..|.||.|
  Rat   267 ------DKKKAEAAAAPAVAP------------------GPAQPGHVSPTPATTSPGEKGEAGTP 307

  Fly   305 SLAKSASEDDP----------FGDSFIYVPSYSILPPP------------PDSGRNR-------- 339
            ..|.:.:...|          ...||...|:.|....|            |.:.:.|        
  Rat   308 VAAGTTAAAIPRRHAPLEQLVRQGSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGT 372

  Fly   340 ---HKPPNK-TPDAVTSLDAMLS--------PPPGTSSSHGSASA--------------GLQAAD 378
               .:||.. ..|.:::|...:|        |.||..|:....||              |.:...
  Rat   373 VPEMEPPGTGDSDGISALCTQISSSFASAGAPVPGPPSATTGTSAWGEPSVPAATAFQPGHKRTP 437

  Fly   379 NDDDNWLQEL-----------------DQQNDVFDTSKVVSSSGLGSVLAMAPLASSESTATPTQ 426
            ::.:.||:|:                 .||.......:...::.:..:..|||.....||     
  Rat   438 SEAERWLEEVSQVAKAQQQQQQQQQQQQQQQQQQQQQQQQQATSVPPMPTMAPTLQPFST----- 497

  Fly   427 QLTEVAAGSGPLADLDIGLSTALGNEEQTSTILSLDAFTDLDPLGTGRTRPYVDKKYFFQELKNP 491
                      |:...|...:       |.:..|..   |.:.|       |:|.           
  Rat   498 ----------PVGPFDTAAA-------QVAVFLPP---THMQP-------PFVP----------- 524

  Fly   492 PKKLLKELSSGSQAGLGLGLSLGQLDGLFPEDSTTISTTTTTATNITAGNPQQNSANTLTSTAST 556
                       :..|||           :|      .........||   |.|..||...|.|..
  Rat   525 -----------AYPGLG-----------YP------PMPRVPVVGIT---PSQMVANAFCSAAQL 558

  Fly   557 AASLGQLLSTVALNPDPLPAPISIPTSISHSITPSAELKLLLGHVTNPPNPTGHYYTTEPPTLNS 621
            ......||......|.|     :.|::      |..:.:         |.|.|..:   ||    
  Rat   559 QPQPATLLGKAGAFPPP-----TAPSA------PGGQAR---------PRPNGAPW---PP---- 596

  Fly   622 LENPHPPADPVLLPRDTDPFSPTRKKSDPDPFQESDLFAKLDAFEFEAPPAVPAPSIPNLATETK 686
              .|.|...|.|                 |||:..  :|.|     |..|||..||         
  Rat   597 --EPAPAPAPEL-----------------DPFEAQ--WAAL-----EGKPAVEKPS--------- 626

  Fly   687 ANVFNGPLQ 695
             |.|:|.||
  Rat   627 -NPFSGDLQ 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 38/133 (29%)
NumblXP_006228627.1 PTB_Numb 91..225 CDD:241298 38/132 (29%)
NumbF 314..398 CDD:283874 13/83 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334815
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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