DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dab and Dab1

DIOPT Version :9

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:XP_017448664.1 Gene:Dab1 / 266729 RGDID:628770 Length:588 Species:Rattus norvegicus


Alignment Length:605 Identity:171/605 - (28%)
Similarity:250/605 - (41%) Gaps:153/605 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RFFGDGVQFKAKLIGILEVGEARGDRMCQEALQDLKMAI---RAAGEHKQRITIHVTIDGLRLRD 104
            ||.|:||::|||||||.||..||||::||:::..||..:   |:.|||||:|.:.::..|:::.|
  Rat    34 RFKGEGVRYKAKLIGIDEVSAARGDKLCQDSMMKLKGVVAGARSKGEHKQKIFLTISFGGIKIFD 98

  Fly   105 EKTGDSLYHHPVHKISFIAQDMTDSRAFGYIFGSPDSGHRFFGIKTDKAASQVVLAMRDLFQVVF 169
            ||||...:||.||:||:||:|:||.|||||:.|. :..|||..|||.:||..|:|.:|||||:::
  Rat    99 EKTGALQHHHAVHEISYIAKDITDHRAFGYVCGK-EGNHRFVAIKTAQAAEPVILDLRDLFQLIY 162

  Fly   170 ELKKKEIEMARQQIQGKSLHDHSSQLASLSSLKSSGLGG-------MGLGHSDLASGGISSGHAL 227
            |||:      |::::.|:..|...:.|...::....:..       ...||..:.......    
  Rat   163 ELKQ------REELEKKAQKDKQCEQAVYQTILEEDVEDPVYQYIVFEAGHEPIRDPETEE---- 217

  Fly   228 TLLGSSLSTTNGTSRLGVSLDVAKASGSAAKEVSPESVAD-LVDLEQELTSLQRGISQMERITPN 291
                :.........:.|| .||.|:        .|.|.:. |.|.|          ::....|||
  Rat   218 ----NIYQVPTSQKKEGV-YDVPKS--------QPVSNSQPLEDFE----------ARFAAATPN 259

  Fly   292 EPTTSSTGGAGHPSL--------AKSASEDDPFGDSFIYVPSYSILPPPPDSGRNRHKPPNKTPD 348
                      |:.|:        .|:.::.:.|||          :..|||.    ..||  || 
  Rat   260 ----------GNLSMDFDELLEATKAVTQLELFGD----------MSTPPDI----TSPP--TP- 297

  Fly   349 AVTSLDAMLSPP----PGTSSSHGSASAGLQAADND--------DDNWLQE-LDQQNDVFDTSKV 400
             .|..||.|..|    ||::...||.|.|..|..:.        ...|.|: |.||.........
  Rat   298 -ATPGDAFLPAPSQTLPGSADVFGSMSFGTAAVPSGYVAMGAVLPSFWGQQPLVQQQIAMGAQPP 361

  Fly   401 VSSSGLGSVLAMAPLASSESTATP-TQQLTEVAAGSGPLADLDIGLSTALGNEEQTSTILSLDAF 464
            |:....|:    .|:|..:....| |||.....||..|.|..           ..|.|::.|.|.
  Rat   362 VAQVIPGA----QPIAWGQPGLFPATQQPWPTVAGQFPPAAF-----------MPTQTVMPLPAA 411

  Fly   465 T---DLDPLGT-------GRTRPYVDKKYFFQELKNPPKKLLKELSSGSQAGLGLGLSLGQLDGL 519
            .   .|.||.|       .|:.|..||         |.:|:.||:....|......:...:.|  
  Rat   412 MFQGPLTPLATVPGTNDSARSSPQSDK---------PRQKMGKEMFKDFQMAQPPPVPSRKPD-- 465

  Fly   520 FPEDSTTISTTTTTATNITAGNPQQN--------SANTLTSTASTAASLGQLLSTVALNPDPLPA 576
              :.|.|.::...::.....|..|..        |...||...||         |.:.|..|.||
  Rat   466 --QPSLTCTSEAFSSYFNKVGVAQDTDDCDDFDISQLNLTPVTST---------TPSTNSPPTPA 519

  Fly   577 P-ISIP--TSISHSITPSAE 593
            | .|.|  :|.||...|:|:
  Rat   520 PRQSSPSKSSASHVSDPTAD 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 70/140 (50%)
Dab1XP_017448664.1 PTB_Dab 25..174 CDD:269926 71/146 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334829
Domainoid 1 1.000 109 1.000 Domainoid score I6225
eggNOG 1 0.900 - - E1_KOG3535
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002247
OrthoInspector 1 1.000 - - otm45486
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11232
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.840

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