DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dab and Numbl

DIOPT Version :9

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:XP_006539678.1 Gene:Numbl / 18223 MGIID:894702 Length:608 Species:Mus musculus


Alignment Length:711 Identity:155/711 - (21%)
Similarity:222/711 - (31%) Gaps:259/711 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 FKAKLIGILEVGEARGDRMCQEALQDLKMAIRAAGEHKQRITIHVTIDGLRLRDEKTGDSLYHHP 115
            |..:.:|.:||.|:||..:|::|::.||    |.|....:..:.|:.||||:.|:||.|.|....
Mouse    84 FPVRYLGHVEVEESRGMHVCEDAVKKLK----AMGRKSVKSVLWVSADGLRVVDDKTKDLLVDQT 144

  Fly   116 VHKISFIAQDMTDSRAFGYIFGSPDSG----HRFFGIKTDKAASQVVLAMRDLFQVVFELKKKEI 176
            :.|:||.|.|....:||.||.....:.    |.|..:|  .:..::..|:...|....|      
Mouse   145 IEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALK--DSGERLSHAVGCAFAACLE------ 201

  Fly   177 EMARQQIQGKSLHDHSSQLASLSSLKSSGLGGMGLGHSDLASGGISSGHALTLLGSSLSTTNGTS 241
               |:|.:.|.....::..||.:|....|        |...|||          |.......|  
Mouse   202 ---RKQRREKECGVTAAFDASRTSFAREG--------SFRLSGG----------GRPAEREAG-- 243

  Fly   242 RLGVSLDVAKASGSAAKEVSPESVADLVDLEQELTSLQRGISQMERITPNEPTTS--STGGAGHP 304
                  |..||..:||..|:|                  |.:|...::|...|||  ..|.||.|
Mouse   244 ------DKKKAEAAAAPAVAP------------------GPAQPGHVSPTPATTSPGEKGEAGTP 284

  Fly   305 SLAKSASEDDP----------FGDSFIYVPSYSILPPP------------PDSGRNR-------- 339
            ..|.:.:...|          ...||...|:.|....|            |.:.:.|        
Mouse   285 VAAGTTAAAIPRRHAPLEQLVRQGSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGT 349

  Fly   340 ---HKPPNK-TPDAVTSLDAMLS------------PPPGT--SSSHGSASAGLQAA--------D 378
               .:||.. ..|.:.:|...:|            |||.|  :|:.|..|....||        .
Mouse   350 VPEMEPPGTGDSDGINALCTQISSSFASAGAPASGPPPATTGTSAWGEPSVPAAAAFQPGHKRTP 414

  Fly   379 NDDDNWLQELDQ----QNDVFDTSKVVSSSGLGSVLAMAPLASSESTATPTQQLTEVAAGSGPLA 439
            ::.:.||:|:.|    |.......:........||..|..:|       ||.|     ..|.|:.
Mouse   415 SEAERWLEEVSQVAKAQQQQQQQQQQQQQQQATSVPPMPTMA-------PTLQ-----PFSAPVG 467

  Fly   440 DLDIGLSTALGNEEQTSTILSLDAFTDLDPLGTGRTRPYVDKKYFFQELKNPPKKLLKELSSGSQ 504
            ..|...:       |.:..|..   |.:.|       |:|.                      :.
Mouse   468 PFDTAAA-------QVAVFLPP---THMQP-------PFVP----------------------AY 493

  Fly   505 AGLGLGLSLGQLDGLFPEDSTTISTTTTTATNITAGNPQQNSANTLTSTASTAASLGQLLSTVAL 569
            .|||           :|      .........||   |.|..||...|.|........||.....
Mouse   494 PGLG-----------YP------PMPRVPVVGIT---PSQMVANAFCSAAQLQPQPATLLGKAGA 538

  Fly   570 NPDPLPAPISIPTSISHSITPSAELKLLLGHVTNPPNPTGHYYTTEPPTLNSLENPHPPADPVLL 634
            .|.|     :.|::      |..:.:         |.|.|..:   ||      .|.|...|.| 
Mouse   539 FPPP-----AAPSA------PGGQAR---------PRPNGAPW---PP------EPAPAPAPEL- 573

  Fly   635 PRDTDPFSPTRKKSDPDPFQESDLFAKLDAFEFEAPPAVPAPSIPNLATETKANVFNGPLQ 695
                            |||:..  :|.|     |..|||..||          |.|:|.||
Mouse   574 ----------------DPFEAQ--WAAL-----EGKPAVEKPS----------NPFSGDLQ 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 38/133 (29%)
NumblXP_006539678.1 PTB_Numb 68..202 CDD:241298 38/132 (29%)
PHA03247 <263..594 CDD:223021 90/464 (19%)
NumbF 293..375 CDD:368837 13/81 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831097
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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