DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dab and dab-1

DIOPT Version :9

Sequence 1:NP_001163455.2 Gene:Dab / 39866 FlyBaseID:FBgn0000414 Length:2360 Species:Drosophila melanogaster
Sequence 2:NP_001360462.1 Gene:dab-1 / 174323 WormBaseID:WBGene00000894 Length:494 Species:Caenorhabditis elegans


Alignment Length:549 Identity:154/549 - (28%)
Similarity:225/549 - (40%) Gaps:202/549 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NDPGRFFGDGVQFKAKLIGILEVGEARGDRMCQEALQDLKMAIRAAGEHKQRITIHVTIDGLRLR 103
            :||.||..:|:.:|.||||..:|.:||||.||.||::..|..|:|||.||.|||:.:.|||:::.
 Worm    42 SDPFRFQNNGISYKGKLIGEQDVDKARGDAMCAEAMRTAKSIIKAAGAHKTRITLQINIDGIKVL 106

  Fly   104 DEKTGDSLYHHPVHKISFIAQDMTDSRAFGYIFGSPDSGHRFFGIKTDKAASQVVLAMRDLFQVV 168
            |||:|..|::.||.:|||||:|.:|:||||.::|.|...::|:||||.:||.|.|||:||:||||
 Worm   107 DEKSGAVLHNFPVSRISFIARDSSDARAFGLVYGEPGGKYKFYGIKTAQAADQAVLAIRDMFQVV 171

  Fly   169 FELKKKEIEMARQQIQGKSLHDHSSQLASLSSLKSSGLGGMGLGHSDLASGGISSGHALTLLGSS 233
            ||:|||:||..:||    .:.|                ||..:.......||:            
 Worm   172 FEMKKKQIEQVKQQ----QIQD----------------GGAEISFQSKKEGGV------------ 204

  Fly   234 LSTTNGTSRLGVSLDVAKASGSAAKEVSPESVADLVDLEQELTSLQRGISQMERITPNEPTTSST 298
                                          :||||:|||.||..::||:.|:..:    ||....
 Worm   205 ------------------------------AVADLLDLESELQQIERGVQQLSTV----PTNCDA 235

  Fly   299 GGAGHPSLAKSASEDDPFGDSFIYVPSYSILPPPPDSGRNRHKPPNKTPDAVTSLDAMLSPPPGT 363
            .||            .||||.|:                          |:..|          |
 Worm   236 FGA------------SPFGDPFV--------------------------DSFNS----------T 252

  Fly   364 SSSHGSAS--------AGL-------------QAADNDDDNW------------LQELDQQNDVF 395
            ::|:|:|:        .||             |.......||            .|:..||....
 Worm   253 ATSNGTANMSGTQVPFGGLQLPQVQQMQMPMVQIPQQSHQNWPTSGAGSFDAWGQQQQQQQMHHA 317

  Fly   396 DTSKVVSSSGLGSVLAMAPLASSESTATPTQQLTEVA-----------AGSGPLADLD-IGLSTA 448
            .::....::|....   .|.||:.:|..|...|..||           :.:.|.:::| .|..|.
 Worm   318 HSTPAFGTNGFSDT---NPFASAFNTQAPPPPLPTVAPTQYRDPFSVHSSAIPNSNIDWTGTGTT 379

  Fly   449 LGN--------EEQTS-----------------------TILSL-DAFT---DLDPL--GTGRTR 476
            ..|        ::|:|                       .:.|| :|||   |:|.|  |.|...
 Worm   380 KENMAPSTNIQQQQSSLHHASTFANFGDNKFRAETWSEKKVTSLEEAFTKLVDMDALVGGQGIKE 444

  Fly   477 PYVDKKYFFQELKNPPKKLLKELSSGSQA 505
               .||..|:.:.||||..|..:|:...|
 Worm   445 ---TKKNPFEHILNPPKASLNSMSTTCSA 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DabNP_001163455.2 PTB_Dab 35..181 CDD:269926 76/141 (54%)
dab-1NP_001360462.1 PTB_Dab 37..184 CDD:269926 76/141 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167348
Domainoid 1 1.000 120 1.000 Domainoid score I3578
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7100
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002247
OrthoInspector 1 1.000 - - oto19197
orthoMCL 1 0.900 - - OOG6_111919
Panther 1 1.100 - - LDO PTHR11232
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2975
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.820

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