DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lasp and nrap

DIOPT Version :10

Sequence 1:NP_730192.2 Gene:Lasp / 39864 FlyBaseID:FBgn0063485 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_021335836.1 Gene:nrap / 724004 ZFINID:ZDB-GENE-060616-224 Length:1862 Species:Danio rerio


Alignment Length:829 Identity:159/829 - (19%)
Similarity:279/829 - (33%) Gaps:255/829 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MN-KTCARCQKVVYPIEELKCLDKTWHKTCFKCTECGMTLNMKTYKGYNKMPYCEAHIPKAKA-T 63
            || :.||||..||||.|::..:.:.|||.||.|..|.|.|....|..:.|.|||:.|.||... |
Zfish     1 MNVQKCARCGFVVYPAEKVNLIGQNWHKACFHCEVCKMVLTANNYVSHQKRPYCQVHNPKNNTFT 65

  Fly    64 AIADTP----------------------------------------------------------- 69
            ::.:||                                                           
Zfish    66 SVYETPVNINAKKQSEAVSENKYKEEGERFMSTFHYDMRSKEIEQARKASQLASQQQGYQTEFVG 130

  Fly    70 ------------ELKRIAENTKIQSNVKYHADFEKAKGKFTQVADDPETLRIKQNTKHISNVAYH 122
                        |:.|:::..|..|:|:|....|....:||.|||.||.|..|......|:|.|.
Zfish   131 QQSFYSGSVTSQEIVRVSQTQKTISDVEYKRGHETRMLQFTSVADSPEVLHAKTGVSLASDVKYT 195

  Fly   123 GDLEKKAAMEKQRGS--------AEVSDSSN----ESEYFSEQLAAEQFSQYAPTASPIPPAATT 175
            .:.|:    .|.:||        .|::..:|    ..||  ::...|:.|:|. |.:..|.....
Zfish   196 EEYEQ----SKGKGSFPAMITPGYEMAKKANTLASNLEY--KKGHEERVSKYT-TVTDTPDVLLA 253

  Fly   176 LHQQQQQLQHQQQQQYQQHQQQLQQQQHQHQHYLQQQQQTLPPPPIQHQQYNTAAITPTYQ---- 236
            ..|.:....|...:.|:|                |:.:.:.|           |..||.||    
Zfish   254 KTQGKIVSDHVYTEGYEQ----------------QRGKGSFP-----------AHFTPGYQVAKK 291

  Fly   237 --------QLQQQQQQQQQQRAQQQQLHDPYA-------HYQQPQALRQQQQQQQQQQQQLL--- 283
                    :.||:.:|:.:.:|..:.....:|       |:.|.....:.:||:.:.....:   
Zfish   292 AGDMASKVKYQQKYEQEIKGKASTEAGAAEFALAKENAEHFSQHAYTEEYEQQRGKGSFPAMITP 356

  Fly   284 -QQQAIK-----------------QASHLYPTATSQQQQMPPPQSPANPQQQALNSYNEMRSAI- 329
             .|.|.|                 :.|..|.|.|::.          |...::....|::.|.: 
Zfish   357 GYQMAKKAHDIASDLKYKKDFNKMKGSSAYHTLTTED----------NLALKSARKINKLMSEVE 411

  Fly   330 -LQNSHHPSGNSVDQYDQPQQQQHQPQQQSTNPTLVAAQQQQSHHSLLNNNASNGGISHS--HHS 391
             .::.....|:|::..:.||.:......:.|:..    :.::::.:.:..:...|||...  |..
Zfish   412 YKKDLETTKGHSINYCETPQFKNVSKIAKYTSDN----KYKENYTNHMKGHYEGGGIDKKTMHAM 472

  Fly   392 NI---------------NNNGHGSQN--QMLPPQMRRSAASVVAYDGNSKQ--------QVAAGP 431
            |:               ..|..|..|  ..:.|..:.........|.|.:|        ||...|
Zfish   473 NVRKLASDISYKSEYEQEKNVQGEYNYPANITPSYQSQKKLEPLKDKNYRQHIDKLKFSQVTDTP 537

  Fly   432 GAAQ-----NHLQQLYASPNY----AAVTPSENSINVKQHASNGHMPNQQQQHVAGGSNIGKIAD 487
            ...|     :.|..|....||    ...|.|::...:|:..:|..:.:..:.......|..|..:
Zfish   538 EIVQARINAHQLSDLNYKANYEKTKTQYTLSQDMPELKKAKANAELVSDIKYKEDWEKNKSKACE 602

  Fly   488 --YDPLTDGPRVVPNAGRSSTTLVYSSEPRGNQGGNSVYPKRIG-SVSDIDPANGIYGSLTAAEQ 549
              .|.||      ..|.::|..|  :|:.:..:.......|.|| .|||....:.:..:..::|.
Zfish   603 IGLDTLT------LKAAKASRDL--ASDIKYKESYTKNKDKAIGMDVSDSKTLHSLQVAKLSSEV 659

  Fly   550 AHQQQKHQQYYQQVQMMQQQEHPPQQQQMRQQPSYSSLQEKQSRQSTA--MRVYRAIYDYEAQDV 612
            |:::...:        .|.:.|.||..        .:|...:..|:.|  :...:.::||.... 
Zfish   660 AYKKDSKE--------TQSKCHLPQDM--------VNLSHAKKAQALASDLEYRKKLHDYTLLS- 707

  Fly   613 DEVSFREGDVIFEVES-----IDSGWMTG---------RVERTGKTGML 647
            |::..::....::::|     .|..||.|         .||:..|.|.|
Zfish   708 DDMKVQQAKKAYKLQSDNQYRSDLNWMKGVGWEADGCLDVEQAKKAGEL 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LaspNP_730192.2 LIM_LASP 5..57 CDD:188831 23/51 (45%)
Nebulin 67..94 CDD:459977 9/97 (9%)
NEBU 97..127 CDD:128523 12/29 (41%)
SH3_Nebulin_family_C 600..654 CDD:212723 13/62 (21%)
nrapXP_021335836.1 LIM_N_RAP 6..58 CDD:188830 23/51 (45%)
Nebulin 175..202 CDD:459977 9/30 (30%)
Nebulin 246..273 CDD:459977 5/42 (12%)
Nebulin 355..381 CDD:459977 3/25 (12%)
Nebulin 535..562 CDD:459977 6/26 (23%)
NEBU 565..595 CDD:128523 4/29 (14%)
NEBU 672..702 CDD:128523 6/37 (16%)
Nebulin 708..735 CDD:459977 4/26 (15%)
NEBU 771..798 CDD:128523
Nebulin 847..874 CDD:459977
NEBU 1014..1044 CDD:128523
Nebulin 1090..1117 CDD:459977
NEBU 1158..1188 CDD:128523
NEBU 1257..1287 CDD:128523
NEBU 1292..1321 CDD:128523
NEBU 1401..1430 CDD:128523
NEBU 1644..1674 CDD:128523
Blue background indicates that the domain is not in the aligned region.

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