DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lasp and crip2

DIOPT Version :10

Sequence 1:NP_730192.2 Gene:Lasp / 39864 FlyBaseID:FBgn0063485 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_998662.2 Gene:crip2 / 554826 ZFINID:ZDB-GENE-040426-2889 Length:206 Species:Danio rerio


Alignment Length:169 Identity:40/169 - (23%)
Similarity:63/169 - (37%) Gaps:43/169 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNKTCARCQKVVYPIEELKCLDKTWHKTCFKCTECGMTLNMKTYKGYNKMPYCEAHIPKAKA--- 62
            |...|.:|:|.||..|::..|.|.|||.|.||..|..||....:..::..|||  |.|...|   
Zfish     1 MASKCPKCEKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTAGGHAEHDGKPYC--HKPCYAALFG 63

  Fly    63 ----------TAIADTPELKRIAENTKIQSNVKYHADFEKAKGKFTQVADDPETLRIKQNTKHIS 117
                      :.:.:.|      .||....|....|  .||:.|:..|:..|.:           
Zfish    64 PKGVNIGGAGSYVYEAP------TNTSPPPNNGDSA--PKAQEKWVPVSSRPPS----------- 109

  Fly   118 NVAYHGDLEKKAAMEKQRGSAEVSDSSNESEYFSEQLAA 156
                     |..::....|.|.:....::..||:|::.:
Zfish   110 ---------KAGSITTFSGEANLCPRCSKKVYFAEKVTS 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LaspNP_730192.2 LIM_LASP 5..57 CDD:188831 20/51 (39%)
Nebulin 67..94 CDD:459977 6/26 (23%)
NEBU 97..127 CDD:128523 2/29 (7%)
SH3_Nebulin_family_C 600..654 CDD:212723
crip2NP_998662.2 LIM1_TLP 5..58 CDD:188860 22/54 (41%)
LIM_TLP_like 124..177 CDD:188785 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.

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