DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lasp and NEB

DIOPT Version :9

Sequence 1:NP_730192.2 Gene:Lasp / 39864 FlyBaseID:FBgn0063485 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001258137.2 Gene:NEB / 4703 HGNCID:7720 Length:8560 Species:Homo sapiens


Alignment Length:802 Identity:179/802 - (22%)
Similarity:296/802 - (36%) Gaps:244/802 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NMKTYKGYNK-----MPYCEAHIPKAKATAIADTPELKRIAENTKIQSNVKYHADFEKAKGKFTQ 99
            |:.:.|.|.:     |.|.|         .:.||||::|:.||.|..|.::|..|.:.:|||.|.
Human  7813 NLSSQKKYKEDAEKSMSYYE---------TVLDTPEIQRVRENQKNFSLLQYQCDLKNSKGKITV 7868

  Fly   100 VADDPETLRIKQNTKHISNVAYHGDL--------------------------------------- 125
            |.|.||.||:|:|.|:.|:|.|..|:                                       
Human  7869 VQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVKYKEAIGQGTPIPD 7933

  Fly   126 --EKKAAMEKQRGSAEVSDSSN------------------ESEYFSEQLAAEQFSQYAPTASPIP 170
              |.|...|.|:..:.|....|                  ..|.||..|..|...:..||  ||.
Human  7934 LPEVKRVKETQKHISSVMYKENLGTGIPTTVTPEIERVKRNQENFSSVLYKENLGKGIPT--PIT 7996

  Fly   171 PAATTLHQQQQQLQHQQQQQY-----------QQHQQQLQQQQHQHQHYLQQQQQTLPPP----- 219
            |....:.:.|:.......::.           :..:.:|.|:......|.:...:.:|.|     
Human  7997 PEMERVKRNQENFSSILYKENLSKGTPLPVTPEMERVKLNQENFSSVLYKENVGKGIPIPITPEM 8061

  Fly   220 -PIQHQQYNTAA--------------ITPTYQQLQQQQQQ-------------------QQQQRA 250
             .::|.|.|.::              |||..|:::..|:.                   .:.:|.
Human  8062 ERVKHNQENFSSVLYKENLGTGIPIPITPEMQRVKHNQENLSSVLYKENMGKGTPLPVTPEMERV 8126

  Fly   251 QQQQLHDPYAHYQQ------PQALRQQQQQQQQQQQQLLQQQAIKQASHLY--------PTA-TS 300
            :..|.:.....|::      |..:..:.::.:..|:.:        :|.||        |.| |.
Human  8127 KHNQENISSVLYKENMGKGTPLPVTPEMERVKHNQENI--------SSVLYKENMGKGTPLAVTP 8183

  Fly   301 QQQQMPPPQ-----------------SPANPQQQALNSYNEMRSAILQNSHHPSGNSVDQYDQPQ 348
            :.:::...|                 :|..|:.|.:....|..|::|...:  .|.:......|:
Human  8184 EMERVKHNQENISSVLYKENVGKATATPVTPEMQRVKRNQENISSVLYKEN--LGKATPTPFTPE 8246

  Fly   349 QQQHQPQQQS------------TNPTLVAAQQQQSHHSLLNNNASNGGISHSHHSNINNNGHGSQ 401
            .::.:..|::            ..||.|..:.:::..:  ..|.|:...|.|....|    .|..
Human  8247 MERVKRNQENFSSVLYKENMRKATPTPVTPEMERAKRN--QENISSVLYSDSFRKQI----QGKA 8305

  Fly   402 NQML-PPQMRR-----SAASVVAYDGNSKQQ------VAAGP--GAAQNHLQQLYASPNYAAVTP 452
            ..:| .|:|||     ...|.|.|..:.::.      |...|  ...:.::|. ::..||..:..
Human  8306 AYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNMQD-FSDINYRGIQR 8369

  Fly   453 SENSINVKQHASNGHMPNQQQQHVAG----GSNIGKIADYDPLTDGPR------VVPNAGRSSTT 507
            ....:..|::       :|.|:.:.|    .:|.|.:.||||..|..:      :...|.|.|..
Human  8370 KVVEMEQKRN-------DQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMINVQAQRRSRE 8427

  Fly   508 LVYSSEPRGNQGG-----NSVYP-KRIGSVSDIDPANGIYGSLTAAEQAHQQQKHQQYYQQVQMM 566
            ...|:......||     :|..| ..:.:.||    .|::...||.:.|...:..||....|   
Human  8428 QSRSASALSISGGEEKSEHSEAPDHHLSTYSD----GGVFAVSTAYKHAKTTELPQQRSSSV--- 8485

  Fly   567 QQQEHPPQQQQMRQQPSYSSLQEKQSRQSTAMRVYRAIYDYEAQDVDEVSFREGDVIFEVESIDS 631
                       ..||.:.||:   .|..|||.:::||:|||.|.|.|||||::||.|..|::||.
Human  8486 -----------ATQQTTVSSI---PSHPSTAGKIFRAMYDYMAADADEVSFKDGDAIINVQAIDE 8536

  Fly   632 GWMTGRVERTGKTGMLPANYVE 653
            |||.|.|:|||:||||||||||
Human  8537 GWMYGTVQRTGRTGMLPANYVE 8558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LaspNP_730192.2 LIM_LASP 5..57 CDD:188831 6/21 (29%)
Nebulin 68..94 CDD:279252 10/25 (40%)
NEBU 97..127 CDD:128523 14/70 (20%)
SH3_Nebulin_family_C 600..654 CDD:212723 36/54 (67%)
NEBNP_001258137.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9133
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.870

Return to query results.
Submit another query.