DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lasp and crip2l

DIOPT Version :10

Sequence 1:NP_730192.2 Gene:Lasp / 39864 FlyBaseID:FBgn0063485 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001005968.1 Gene:crip2l / 449795 ZFINID:ZDB-GENE-041010-43 Length:202 Species:Danio rerio


Alignment Length:167 Identity:40/167 - (23%)
Similarity:63/167 - (37%) Gaps:42/167 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNKTCARCQKVVYPIEELKCLDKTWHKTCFKCTECGMTLNMKTYKGYNKMPYCE------AHIPK 59
            |...|.:|:|.||..|::..|.|.|||.|.||..|..|||...:..::..|||.      .:.||
Zfish     1 MASKCPKCEKTVYSAEKVTSLGKDWHKFCLKCERCNKTLNPGGHAEHDGKPYCHKPCYAALYGPK 65

  Fly    60 -----AKATAIADTPELKRIAENTKIQSNVKYHADFEKAKGKFTQVADDPETLRIKQNTKHISNV 119
                 ...:.:.|||                              |.||...:.::...|.....
Zfish    66 GVNIGGAGSYVYDTP------------------------------VGDDSVPVAMETKPKTEEKK 100

  Fly   120 AYHGDLEKKAAMEKQRGSAEVSDSSNESEYFSEQLAA 156
            |..|.: |.|:.....|...:....|::.||:|::::
Zfish   101 ATRGPV-KAASFSSFSGEPNICPRCNKTVYFAEKVSS 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LaspNP_730192.2 LIM_LASP 5..57 CDD:188831 21/57 (37%)
Nebulin 67..94 CDD:459977 3/26 (12%)
NEBU 97..127 CDD:128523 6/29 (21%)
SH3_Nebulin_family_C 600..654 CDD:212723
crip2lNP_001005968.1 LIM1_TLP 5..58 CDD:188860 21/52 (40%)
LIM1_TLP 121..174 CDD:188860 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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