DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lasp and csrp3

DIOPT Version :10

Sequence 1:NP_730192.2 Gene:Lasp / 39864 FlyBaseID:FBgn0063485 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001006836.1 Gene:csrp3 / 448578 XenbaseID:XB-GENE-1010170 Length:194 Species:Xenopus tropicalis


Alignment Length:60 Identity:24/60 - (40%)
Similarity:33/60 - (55%) Gaps:5/60 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CARCQKVVYPIEELKCLDKTWHKTCFKCTECGMTLNMKTY-----KGYNKMPYCEAHIPK 59
            |.||||.||..|.:....:.||||||:|..||.:|:..|.     :.|.|:.|.::..||
 Frog   120 CPRCQKSVYAAERVMGGGQPWHKTCFRCAFCGKSLDSTTVTEKDGEIYCKVCYAKSFGPK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LaspNP_730192.2 LIM_LASP 5..57 CDD:188831 22/56 (39%)
Nebulin 67..94 CDD:459977
NEBU 97..127 CDD:128523
SH3_Nebulin_family_C 600..654 CDD:212723
csrp3NP_001006836.1 LIM1_CRP3 9..62 CDD:188865
LIM2_CRP3 120..173 CDD:188866 21/52 (40%)
Blue background indicates that the domain is not in the aligned region.

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