DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lasp and mlp-1

DIOPT Version :10

Sequence 1:NP_730192.2 Gene:Lasp / 39864 FlyBaseID:FBgn0063485 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001367782.1 Gene:mlp-1 / 175847 WormBaseID:WBGene00003375 Length:115 Species:Caenorhabditis elegans


Alignment Length:77 Identity:24/77 - (31%)
Similarity:33/77 - (42%) Gaps:11/77 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CARCQKVVYPIEELKCLDKTWHKTCFKCTECGMTLNMKT-----YKGYNKMPYCEAHIPKAKATA 64
            |.:|.|.||..||:......|||.||||:.|...|:..:     .:.:.|..:|..:.||.....
 Worm    11 CPKCGKSVYAAEEMSAGGYKWHKFCFKCSMCNKLLDSMSCCEHQAQLFCKQCHCRRYGPKGIGFG 75

  Fly    65 IA------DTPE 70
            |.      ||.|
 Worm    76 IGAGSLTMDTGE 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LaspNP_730192.2 LIM_LASP 5..57 CDD:188831 18/56 (32%)
Nebulin 67..94 CDD:459977 3/4 (75%)
NEBU 97..127 CDD:128523
SH3_Nebulin_family_C 600..654 CDD:212723
mlp-1NP_001367782.1 LIM1_MLP84B_like 10..63 CDD:188788 17/51 (33%)
Blue background indicates that the domain is not in the aligned region.

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