DRSC/TRiP Functional Genomics Resources

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Protein Alignment zetaCOP and AT3G09800

DIOPT Version :10

Sequence 1:NP_648910.1 Gene:zetaCOP / 39862 FlyBaseID:FBgn0040512 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001327157.1 Gene:AT3G09800 / 820138 AraportID:AT3G09800 Length:259 Species:Arabidopsis thaliana


Alignment Length:172 Identity:68/172 - (39%)
Similarity:109/172 - (63%) Gaps:7/172 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSN----TEIIMLDGLTCVYKS 68
            ::|.:.::|::|.|:..|||..: ..|...:.:|||.:|:||.::|    .||.:||....|||.
plant    88 LVKKILLLDSEGKRVAVKYYSDD-WPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNIIVYKF 151

  Fly    69 NVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICDGGIILD 133
            ..||.|:|.|...||||||.|||...:|:::|:|:.||||...||||::|.|..||:.|.|::|:
plant   152 AQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLDEMVDQGVVLE 216

  Fly   134 ADPSSVVKRVDLRNDDI--PIAEQTVAQVLQSAREQLKWSIL 173
            .||:.:..:|.:::.:.  .::|||:.|.|.:|||.|..|:|
plant   217 TDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zetaCOPNP_648910.1 Zeta-COP 10..142 CDD:341433 56/135 (41%)
AT3G09800NP_001327157.1 Zeta-COP 90..225 CDD:341433 56/135 (41%)

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