DRSC/TRiP Functional Genomics Resources

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Protein Alignment zetaCOP and Copz1

DIOPT Version :10

Sequence 1:NP_648910.1 Gene:zetaCOP / 39862 FlyBaseID:FBgn0040512 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001344677.1 Gene:Copz1 / 56447 MGIID:1929063 Length:182 Species:Mus musculus


Alignment Length:152 Identity:94/152 - (61%)
Similarity:131/152 - (86%) Gaps:1/152 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYKSNVDLF 73
            :|.:.|:||||:|:.||||| :...::|||||||||:||||||:::||.:|:|||.||||::||:
Mouse    13 VKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGLTVVYKSSIDLY 76

  Fly    74 FYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICDGGIILDADPSS 138
            |||:|::|||||:|::|||||:||:|.:|:||||||.:|||:|.:.||.|||.|||:||::||..
Mouse    77 FYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQ 141

  Fly   139 VVKRVDLRNDDIPIAEQTVAQV 160
            ||.||.||.:|:|:.||||:||
Mouse   142 VVHRVALRGEDVPLTEQTVSQV 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zetaCOPNP_648910.1 Zeta-COP 10..142 CDD:341433 82/131 (63%)
Copz1NP_001344677.1 Zeta-COP 14..145 CDD:341433 82/131 (63%)

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