DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zetaCOP and copz-1

DIOPT Version :10

Sequence 1:NP_648910.1 Gene:zetaCOP / 39862 FlyBaseID:FBgn0040512 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_496338.1 Gene:copz-1 / 174675 WormBaseID:WBGene00010333 Length:184 Species:Caenorhabditis elegans


Alignment Length:171 Identity:91/171 - (53%)
Similarity:138/171 - (80%) Gaps:5/171 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHR-SNTEIIMLDGLTCVYKSNVDL 72
            |||:.|:|.||||:||||||:....|:||||||||:||:||.| ::.:|::|||:||:|:|||||
 Worm    14 IKGIVILDQDGNRVLAKYYDRTTFGTVKEQKAFEKSLFSKTSRNTSADILLLDGVTCLYRSNVDL 78

  Fly    73 FFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICDGGIILDADPS 137
            :|||:|:..||||.|.:.|.||||::|::|:|||||:.::::::.|||..|||||.|||::.|..
 Worm    79 YFYVLGSTRENELFLDATLTCLYDAVSVVLRKNVEKKALIDSMDTIMLIIDEICDEGIIMETDAQ 143

  Fly   138 SVVKRVDLRNDDIPIAEQTVAQV----LQSAREQLKWSILK 174
            :||:|..|::|::..::|:|:|:    ::||.||.|||:||
 Worm   144 AVVQRTALKSDEVSFSDQSVSQIGFSFMKSANEQFKWSLLK 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zetaCOPNP_648910.1 Zeta-COP 10..142 CDD:341433 75/132 (57%)
copz-1NP_496338.1 Zeta-COP 15..148 CDD:341433 75/132 (57%)

Return to query results.
Submit another query.