DRSC/TRiP Functional Genomics Resources

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Protein Alignment zetaCOP and zetaCOP

DIOPT Version :10

Sequence 1:NP_648910.1 Gene:zetaCOP / 39862 FlyBaseID:FBgn0040512 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_316555.4 Gene:zetaCOP / 1277120 VectorBaseID:AGAMI1_007511 Length:177 Species:Anopheles gambiae


Alignment Length:177 Identity:145/177 - (81%)
Similarity:163/177 - (92%) Gaps:3/177 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDGFM---MDIIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGL 62
            ||..|   :..||||||:|||||||||||||||:..|:|||:|:|||||:||||::.||||||||
Mosquito     1 MDSLMEPTLYTIKGMCILDNDGNRILAKYYDKNVFPTVKEQRAYEKNLFSKTHRADAEIIMLDGL 65

  Fly    63 TCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127
            ||||||||||||||||:..|||||||||||||||:|::|||||||||.|||||:|:|||||||||
Mosquito    66 TCVYKSNVDLFFYVMGSTQENELILLSVLNCLYDTITMILKKNVEKRAVLENLDIVMLAFDEICD 130

  Fly   128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVLQSAREQLKWSILK 174
            ||||||||||||:||||||||||||.|||||||||||:||||||:||
Mosquito   131 GGIILDADPSSVMKRVDLRNDDIPIGEQTVAQVLQSAKEQLKWSLLK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zetaCOPNP_648910.1 Zeta-COP 10..142 CDD:341433 110/131 (84%)
zetaCOPXP_316555.4 Zeta-COP 13..145 CDD:341433 110/131 (84%)

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