DRSC/TRiP Functional Genomics Resources

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Protein Alignment zetaCOP and copz2

DIOPT Version :10

Sequence 1:NP_648910.1 Gene:zetaCOP / 39862 FlyBaseID:FBgn0040512 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_002938070.1 Gene:copz2 / 100379766 XenbaseID:XB-GENE-990974 Length:180 Species:Xenopus tropicalis


Alignment Length:153 Identity:55/153 - (35%)
Similarity:100/153 - (65%) Gaps:5/153 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYKSNVDLF 73
            :|...|:|:||.|:|||||. :...:|.||:.|||.:|.::::::.|::::|.:|.:.:...|:.
 Frog    15 VKAFIILDHDGRRLLAKYYG-DAYPSLAEQQEFEKQIFRRSYKADNEVLLVDSVTALCQKLSDIT 78

  Fly    74 FYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICDGGIILDADPSS 138
            .|::|..:||||:||:.|.|:.:|:..:|:|:|::..:|||::...|..|||.|.|:||::|...
 Frog    79 CYIIGGPHENELLLLAALTCICESLCHMLRKHVDRSSLLENMDTAFLVLDEIIDQGVILESDYQQ 143

  Fly   139 VVKRVDLRNDDIPIAEQTVAQVL 161
            ||:|:..:.    |:|.....||
 Frog   144 VVQRLSFKT----ISEPAFGFVL 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zetaCOPNP_648910.1 Zeta-COP 10..142 CDD:341433 50/131 (38%)
copz2XP_002938070.1 longin-like 16..147 CDD:365781 50/131 (38%)

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