DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and ARL3

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_015274.1 Gene:ARL3 / 856056 SGDID:S000005972 Length:198 Species:Saccharomyces cerevisiae


Alignment Length:179 Identity:34/179 - (18%)
Similarity:75/179 - (41%) Gaps:33/179 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 VTTLWNDVGIRACYDRSNEFPLLDSAKYFLDN-----FVRISDAEYIPSTEDILHSRKITTGISQ 199
            |..|:|:      :::..::.:|...   |||     |:.....||..:.:.:   .||...:.|
Yeast     5 VKGLYNN------WNKKEQYSILILG---LDNAGKTTFLETLKKEYSLAFKAL---EKIQPTVGQ 57

  Fly   200 ITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRL 264
            ....:|:     ..:|..:.:|||||...|:.|.:.:.....::|::..|:          :.||
Yeast    58 NVATIPV-----DSKQILKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSD----------RERL 107

  Fly   265 QEALKLFRAVWQNRFLASAGLIVFLNKYDIMER-KIRAGKHIVDYFPEY 312
            .|.....::|..:..:....:::..||.|..:| :::..|.:.:...|:
Yeast   108 DECSTTLQSVVMDEEIEGVPILMLANKQDRQDRMEVQDIKEVFNKIAEH 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 34/179 (19%)
G-alpha 48..392 CDD:206639 34/179 (19%)
ARL3NP_015274.1 Arfrp1 19..185 CDD:206725 31/159 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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