DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and ARFA1F

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001321560.1 Gene:ARFA1F / 837606 AraportID:AT1G10630 Length:181 Species:Arabidopsis thaliana


Alignment Length:111 Identity:34/111 - (30%)
Similarity:50/111 - (45%) Gaps:16/111 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 ILHSRK---ITTGISQITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAVLFLISC 248
            ||:..|   |.|.|..|.|.|   :::......|.::|||||...|..|...|:..|.::|::  
plant    33 ILYKLKLGEIVTTIPTIGFNV---ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV-- 92

  Fly   249 SEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDI 294
               |.|.|:     |:.||......:.....|..|.|:||.||.|:
plant    93 ---DSNDRD-----RVVEARDELHRMLNEDELRDAVLLVFANKQDL 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 34/111 (31%)
G-alpha 48..392 CDD:206639 34/111 (31%)
ARFA1FNP_001321560.1 PLN00223 1..181 CDD:165788 34/111 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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