DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gnaq

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001138271.1 Gene:gnaq / 570108 ZFINID:ZDB-GENE-081104-25 Length:359 Species:Danio rerio


Alignment Length:394 Identity:138/394 - (35%)
Similarity:215/394 - (54%) Gaps:41/394 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLRCLRQQPAKPAAVMTHKEDQYPVSLDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRI 69
            ::.|...:.||.|..:..:       :|..:.:|.....|:  :|:|||||.||||:|.||||||
Zfish     6 IMACCLSEEAKEARRINDE-------IDRQLRRDKKDARRE--LKLLLLGTGESGKSTFIKQMRI 61

  Fly    70 LHINGFTDDERREKIPEIYQNIHESILQLVGQMGVLGIDFGSCTSERSADYILSLPGSAPEYMNE 134
            :|.:|:::::|:.....:||||..|...::..|..|.|.:....::.:|:.:..:..........
Zfish    62 IHGSGYSEEDRKGFTKLVYQNIFTSSQSMIRAMDTLQILYKYEHNKANANIVREVDVEKVFLFVN 126

  Fly   135 EYCDHVTTLWNDVGIRACYDRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGISQ 199
            .|.|.:.:||||.||:.||||..|:.|.||.||:|::..||::..|||:.:|:|..|..||||.:
Zfish   127 PYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNSLDRIANPSYIPTQQDVLRVRVPTTGIIE 191

  Fly   200 ITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRL 264
            ..|.:.        ...|:|.||||||.:|.|||..||.:.:::||::.||:||.|.|..::||:
Zfish   192 YPFDLQ--------SVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRM 248

  Fly   265 QEALKLFRAVWQNRFLASAGLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESD 329
            :|:..|||.:....:..::.:|:||||.|::|.||.. .|:|||||||:.    ||:|     :.
Zfish   249 EESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMF-SHLVDYFPEYDG----PQRD-----AQ 303

  Fly   330 WTKMFIKQKLVDITQEPFKRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILSENVS 394
            ..:.||.:..||:..:              ||:..|.|||.||||..||.||..|:..||...:.
Zfish   304 TAREFILKMFVDLNPD--------------SEKIIYSHFTCATDTENIRFVFAAVKDTILQLTLK 354

  Fly   395 SMGL 398
            ...|
Zfish   355 EYNL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 133/366 (36%)
G-alpha 48..392 CDD:206639 130/343 (38%)
gnaqNP_001138271.1 G_alpha 19..357 CDD:214595 133/378 (35%)
G-alpha 40..353 CDD:206639 130/344 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586308
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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