DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and Gnao1

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_059023.1 Gene:Gnao1 / 50664 RGDID:628732 Length:354 Species:Rattus norvegicus


Alignment Length:378 Identity:132/378 - (34%)
Similarity:207/378 - (54%) Gaps:49/378 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SLDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHES 94
            :::.::.:|.....:|  ||:||||..||||:||:|||:|:|.:||:.::.::..|.:|.|..:|
  Rat    18 AIEKNLKEDGISAAKD--VKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQS 80

  Fly    95 ILQLVGQMGVLGIDFGSCTSERSA------DYILSLPGSAPEYMNEEYCDHVTTLWNDVGIRACY 153
            :..:|..|..||:::|.  .||.|      |.:..:..:.|  .:.|....:..||.|.||:.|:
  Rat    81 LAAIVRAMDTLGVEYGD--KERKADSKMVCDVVSRMEDTEP--FSAELLSAMMRLWGDSGIQECF 141

  Fly   154 DRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGI--SQITFRVPIPKSMGGGEQQ 216
            :||.|:.|.|||||:||:..||..|:|.|:.:|||.:|..||||  :..||:          ...
  Rat   142 NRSREYQLNDSAKYYLDSLDRIGAADYQPTEQDILRTRVKTTGIVETHFTFK----------NLH 196

  Fly   217 FQMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLA 281
            |:::||||||.:|.|||..||.:.|::|.::.|.:||.|.||.:.||:.|:|.||.::..|:|..
  Rat   197 FRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFI 261

  Fly   282 SAGLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQEP 346
            ...:|:||||.|:...||:... :...||||..       .|.:.::   ..:|:      ||..
  Rat   262 DTSIILFLNKKDLFGEKIKKSP-LTICFPEYPG-------SNTYEDA---AAYIQ------TQFE 309

  Fly   347 FKRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
            .|..|.|        :|.|.|.|.||||..|:.||..|..:|::.|:...||:
  Rat   310 SKNRSPN--------KEIYCHMTCATDTNNIQVVFDAVTDIIIANNLRGCGLY 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 130/374 (35%)
G-alpha 48..392 CDD:206639 127/351 (36%)
Gnao1NP_059023.1 G-alpha 34..348 CDD:206639 127/352 (36%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 35..48 9/12 (75%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 174..182 4/7 (57%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 197..206 5/8 (63%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 266..273 5/6 (83%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 324..329 3/4 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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