DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gnao1b

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_957122.1 Gene:gnao1b / 393801 ZFINID:ZDB-GENE-040426-1693 Length:354 Species:Danio rerio


Alignment Length:374 Identity:126/374 - (33%)
Similarity:200/374 - (53%) Gaps:41/374 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SLDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHES 94
            :::.::.:|.....:|  ||:||||..||||:||:|||:|:|.:||:.|:.::..|.:|.|..:|
Zfish    18 AIEKNLKEDGISAAKD--VKLLLLGGGESGKSTIVKQMKIIHEDGFSGDDVKQFKPVVYSNTIQS 80

  Fly    95 ILQLVGQMGVLGIDFGSCTSERSADYILSLPGSAPEYMNEEYCDHVTT----LWNDVGIRACYDR 155
            :..::..|..|||::........|..:..:.|...:  .|.|...:..    ||.|.|.:||::|
Zfish    81 LSAILRAMETLGIEYSDKDRLADAKMVFDVVGRMED--TEPYSTELLAAMIRLWTDTGTQACFNR 143

  Fly   156 SNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQFQMY 220
            |.|:.|.|||:|:||:..||...:|:|:.:|||.:|..||||.:..|..   |::     .|:::
Zfish   144 SREYQLNDSAQYYLDSLQRIGSPDYLPTEQDILRTRVKTTGIVETHFSF---KNL-----NFRLF 200

  Fly   221 DVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGL 285
            ||||||.:|.|||..||.:.|::|.::.|.:||.|.||.:.||:.|:|.||.::..|:|.....:
Zfish   201 DVGGQRSERKKWIHCFEDVTAIIFCVAMSGYDQMLHEDETTNRMHESLMLFDSICNNKFFVDTSI 265

  Fly   286 IVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQEPFKRH 350
            |:||||.|:...|| ....:...||||..       .|.|           :......|..|:..
Zfish   266 ILFLNKKDLFGEKI-VKSPLSICFPEYTG-------PNTF-----------EAAASYIQGQFETK 311

  Fly   351 SRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
            :|      :..:|.|.|.|.||||..|:.||..|..:|::.|:...||:
Zfish   312 NR------SPNKEIYCHLTCATDTGNIQVVFDAVTDIIIANNLRGCGLY 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 124/370 (34%)
G-alpha 48..392 CDD:206639 121/347 (35%)
gnao1bNP_957122.1 G_alpha 14..352 CDD:214595 124/370 (34%)
G-alpha 43..348 CDD:206639 115/339 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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