DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and Gnat1

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001102250.2 Gene:Gnat1 / 363143 RGDID:1304683 Length:350 Species:Rattus norvegicus


Alignment Length:379 Identity:134/379 - (35%)
Similarity:215/379 - (56%) Gaps:39/379 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EDQYPVSLDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIY 88
            |:::...|:..:.:|..|..|  |||:||||..||||:||:|||:|:|.:|::.:|..|.|..||
  Rat     8 EEKHSRELEKKLKEDAEKDAR--TVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIY 70

  Fly    89 QNIHESILQLVGQMGVLGIDFGSCTSERSADYILSLPGSAPE-YMNEEYCDHVTTLWNDVGIRAC 152
            .|..:|||.:|..|..|.|.:|....:..|..::.:..:..| .|.:|..|.:..||.|.||:||
  Rat    71 GNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADTIEEGTMPKEMSDIIQRLWKDSGIQAC 135

  Fly   153 YDRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGI--SQITFRVPIPKSMGGGEQ 215
            :||::|:.|.|||.|:|.:..|:....|:|:.:|:|.||..||||  :|.:|:          :.
  Rat   136 FDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFK----------DL 190

  Fly   216 QFQMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFL 280
            .|:|:||||||.:|.|||..|||:..::|:.:.|.:|..|.||...||:.|:|.||.::..:|:.
  Rat   191 NFRMFDVGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYF 255

  Fly   281 ASAGLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQE 345
            |:..:::||||.|:...||:.. |:...||:|:.       .|.:.::.   .:||.:.:::   
  Rat   256 ATTSIVLFLNKKDVFSEKIKKA-HLSICFPDYDG-------PNTYDDAG---NYIKVQFLEL--- 306

  Fly   346 PFKRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
                :.|..|      :|.|.|.|.||||:.::.||..|..:|:.||:...|||
  Rat   307 ----NMRRDV------KEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKDCGLF 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 130/369 (35%)
G-alpha 48..392 CDD:206639 123/346 (36%)
Gnat1NP_001102250.2 G-alpha 30..344 CDD:206639 124/347 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345187
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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