DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gpa2

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_593803.1 Gene:gpa2 / 2541720 PomBaseID:SPAC23H3.13c Length:354 Species:Schizosaccharomyces pombe


Alignment Length:361 Identity:116/361 - (32%)
Similarity:192/361 - (53%) Gaps:52/361 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHES---ILQLVGQMGVLGIDFG 110
            |:||||.::|||:||.||::||:.|||:.:|....||.|.:|:.||   :::::.|.|:.....|
pombe    36 KVLLLGASDSGKSTISKQIKILNKNGFSQEEIMTFIPVIRRNLLESAKTLVKIIVQKGINLDPLG 100

  Fly   111 SCTSERSADYILSLPGSAPEYMNEEYCDHVTTLWNDVGIRACYDRSNEFPLLDSAKYFLDNFVRI 175
            :    .:.:.|.....:..|.:|......:|:||:...:|:| ...|:..|:|||.||......|
pombe   101 T----HNCEIIEKFNPTPGELINANIGQAITSLWSANSVRSC-TYGNDSVLIDSAPYFFSRADEI 160

  Fly   176 SDAEYIPSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQ 240
            ....|:|:.:|||.||..|.|||:|:|.:        ...|.:|:||||||.:|.|||..||.:.
pombe   161 CSRHYVPTIDDILRSRNSTLGISEISFTL--------DHLQIRMFDVGGQRTERRKWIYCFENVN 217

  Fly   241 AVLFLISCSEFDQNL--REDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMERKIRAGK 303
            :::|.:|.:::|:.|  |..|.:|||.|::.||.::..:::...:.:|:||||:|:..:|:   :
pombe   218 SIIFCVSLNDYDKKLYERAAPERNRLVESISLFDSIINSQWFMHSSIILFLNKFDLFRKKL---E 279

  Fly   304 HI--VDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQE---PFKRHSRNQVDLGTSERE 363
            |:  .||||:||.                     |..:..||:.   .|...|.|:     ::..
pombe   280 HVPFQDYFPQYEG---------------------KNSVKSITRYILWLFVNPSINR-----AKHN 318

  Fly   364 CYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
            .|.|.|.|.||..|:.||..|::.||..::...|:|
pombe   319 IYPHITTAVDTSNIKVVFSAVKETILQHSLKEAGMF 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 114/357 (32%)
G-alpha 48..392 CDD:206639 114/352 (32%)
gpa2NP_593803.1 G_alpha 14..352 CDD:214595 114/357 (32%)
G-alpha 35..348 CDD:206639 114/353 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10218
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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