DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gpa1

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_595960.1 Gene:gpa1 / 2540414 PomBaseID:SPBC24C6.06 Length:407 Species:Schizosaccharomyces pombe


Alignment Length:380 Identity:129/380 - (33%)
Similarity:193/380 - (50%) Gaps:56/380 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 AKGVR--------DTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHESIL 96
            :.|||        ...:|:||||..:||||||:||||:|:..||:...|::....|::||..|:.
pombe    59 SSGVRVKGNSTSGGNDIKVLLLGAGDSGKTTIMKQMRLLYSPGFSQVVRKQYRVMIFENIISSLC 123

  Fly    97 QLVGQMGVLGIDFGSCTSERSADYILSLPGSAP-EYMNEEYCDHVTTLWNDVGIRACYDRSNEFP 160
            .|:..|....:.. ...:|:....||....|.| |..:.|..:.|..|..|..:|..........
pombe   124 LLLEAMDNSNVSL-LPENEKYRAVILRKHTSQPNEPFSPEIYEAVHALTLDTKLRTVQSCGTNLS 187

  Fly   161 LLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQFQMYDVGGQ 225
            |||:..|:.|:..||.|.:||||.:||||.|..|||||:.||.:        ....::.:|||||
pombe   188 LLDNFYYYQDHIDRIFDPQYIPSDQDILHCRIKTTGISEETFLL--------NRHHYRFFDVGGQ 244

  Fly   226 RDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLN 290
            |.:|.|||..||.:.|:|||:|.:.:||.|.||.|.|::||||.|:.::..:.:.:.:.:|:|||
pombe   245 RSERRKWIHCFENVTALLFLVSLAGYDQCLVEDNSGNQMQEALLLWDSICNSSWFSESAMILFLN 309

  Fly   291 KYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQEP--------- 346
            |.|:.:||:.... |..:||:|::....|             .|::      ||.|         
pombe   310 KLDLFKRKVHISP-IQKHFPDYQEVGSTP-------------TFVQ------TQCPLADNAVRSG 354

  Fly   347 -----FKRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILSENVSSM 396
                 .|..|.|::    :.|.||.|||.||||..::.|...||..|:|.|:.|:
pombe   355 MYYFYLKFESLNRI----ASRSCYCHFTTATDTSLLQRVMVSVQDTIMSNNLQSL 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 129/380 (34%)
G-alpha 48..392 CDD:206639 124/358 (35%)
gpa1NP_595960.1 G_alpha 68..406 CDD:214595 126/371 (34%)
G-alpha 75..402 CDD:206639 124/359 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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