DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and Gnal

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001178765.1 Gene:Gnal / 24611 RGDID:2715 Length:450 Species:Rattus norvegicus


Alignment Length:400 Identity:147/400 - (36%)
Similarity:235/400 - (58%) Gaps:46/400 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LRCLRQQPAKPAAVMTHKEDQYPVSLDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRIL 70
            ||...::.||.|..::...|:        :|::..:.::.|. ::||||..||||:||:||||||
  Rat    79 LRAEEREAAKEARKVSRGIDR--------MLREQKRDLQQTH-RLLLLGAGESGKSTIVKQMRIL 134

  Fly    71 HINGFTDDERREKIPEIYQNIHESILQLVGQMGVL--GIDFGSCTSERSADYILSLPGSAP---- 129
            |:|||..:|:::||.:|.:|:.::|:.:|..|..:  .:...:..::..:|||.|:   ||    
  Rat   135 HVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSI---APITDF 196

  Fly   130 EYMNEEYCDHVTTLWNDVGIRACYDRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKIT 194
            || ::|:.|||..||:|.|::||::||||:.|:|.|:|||:....:|..:|.|:.:|:|..|.:|
  Rat   197 EY-SQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLT 260

  Fly   195 TGISQITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDP 259
            :||.:..|:|        .:..|.|:|||||||:|.||||.|..:.|::::.:||.::..:|||.
  Rat   261 SGIFETRFQV--------DKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDN 317

  Fly   260 SQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMERKIRAGK-HIVDYFPEYEDFCKRPQQDN 323
            :.|||:|:|.||.::|.||:|.:..:|:||||.|::..|:.||| .|.||||||.::........
  Rat   318 NTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATP 382

  Fly   324 CFGES---DWTKMFIKQKLVDITQEPFKRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCD-- 383
            ..||.   ...|.||:...:.|:           ...|..:..||.|||.|.||..||.||.|  
  Rat   383 DAGEDPKVTRAKFFIRDLFLRIS-----------TATGDGKHYCYPHFTCAVDTENIRRVFNDCR 436

  Fly   384 --VQKMILSE 391
              :|:|.|.:
  Rat   437 DIIQRMHLKQ 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 141/375 (38%)
G-alpha 48..392 CDD:206639 139/357 (39%)
GnalNP_001178765.1 G_alpha 93..447 CDD:214595 142/385 (37%)
G-alpha 112..444 CDD:206639 138/355 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345215
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D325067at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10218
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

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