DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gpa-12

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_509557.1 Gene:gpa-12 / 181157 WormBaseID:WBGene00001674 Length:355 Species:Caenorhabditis elegans


Alignment Length:396 Identity:118/396 - (29%)
Similarity:193/396 - (48%) Gaps:72/396 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KEDQYPVSLDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRILHING-FTDDERREKIPE 86
            |:|:...:::..:.|:  :.:....:.:||||:.||||:|.:|||.|:|..| ||.||.|....:
 Worm     7 KKDERTKTIEKELHKE--RKIMRRQINLLLLGSGESGKSTFVKQMHIIHGAGEFTADEVRAYRQQ 69

  Fly    87 IYQNIHESILQLVGQMGVLGIDFGSCTSERSADYILSLPGSAPEYMN-------EEYCDHVTTLW 144
            ||||...::..|:.....|||.:.....:...:.::..  |..:.:.       .|....::..|
 Worm    70 IYQNAISAMRVLLDARNKLGIAWEDPKRQVEVEKVMRF--SVGDLLKGIDFTTFVEVAPIISDFW 132

  Fly   145 NDVGIRACYDRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGISQITFRV-PIPK 208
            ||..||..|::.|.|.:.||.:||.::..||:..::.|:..|||..||.|.|||:..|.: .|| 
 Worm   133 NDAAIRKTYEQRNLFQISDSCQYFFEHIPRIAMPDFYPTNRDILFCRKATRGISEHIFEINKIP- 196

  Fly   209 SMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRA 273
                    |:..||||||.||.||.|.|..|.::||:::.:|:||.:.||...||:.|:..:|..
 Worm   197 --------FRFIDVGGQRSQRQKWFQCFTDITSILFMVASNEYDQVILEDRRTNRVVESRSVFET 253

  Fly   274 VWQNRFLASAGLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQK 338
            :..||..::..:|:|:||.|:::.|:                   |:.|            |:|.
 Worm   254 IVNNRAFSNVSIILFMNKNDLLQEKV-------------------PKSD------------IRQY 287

  Fly   339 LVDIT-------------QEPFKRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILS 390
            ..|.|             .:.|:...|::.      |..:||||.|.||..||.||.||::.||.
 Worm   288 FTDFTGDHTLVRDVQFFLVDKFEASRRDRA------RPFFYHFTTAVDTENIRRVFRDVRESILE 346

  Fly   391 ENVSSM 396
            :|:.::
 Worm   347 QNLKTL 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 116/389 (30%)
G-alpha 48..392 CDD:206639 114/365 (31%)
gpa-12NP_509557.1 G_alpha 10..353 CDD:214595 116/393 (30%)
G-alpha 30..349 CDD:206639 114/366 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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