DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and odr-3

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_506290.1 Gene:odr-3 / 179806 WormBaseID:WBGene00003850 Length:356 Species:Caenorhabditis elegans


Alignment Length:398 Identity:128/398 - (32%)
Similarity:204/398 - (51%) Gaps:79/398 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 HKEDQYPVSLDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPE 86
            :||.:..::.|        |....:.||:||||..|.||:|::|||:|||.||||::|..||...
 Worm    16 NKEIEKQLNAD--------KRAGSSIVKLLLLGAGECGKSTVLKQMQILHSNGFTEEEVNEKRAI 72

  Fly    87 IYQNIHESILQLVGQMGVLGIDFGSCTSERSADYILSLP-------------------GSAPEYM 132
            :|.|...::                ||..|:.|.:|.||                   |...|.:
 Worm    73 VYNNTVSAM----------------CTILRAMDGVLHLPLENGQKEAEKAIVMKVQENGEEGEAL 121

  Fly   133 NEEYCDHVTTLWNDVGIRACYDRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGI 197
            .||....:.:||.|.|::..::..:|:.|.|||||||||..|||:..|.|:.:|||:||..|||:
 Worm   122 TEEVSKAIQSLWADPGVKKAFEMRSEYQLPDSAKYFLDNCQRISEPGYRPNDQDILYSRVATTGV 186

  Fly   198 SQITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQN 262
            .::.|::.        |..|:::||||||.:|.|||..|:.:::::|:.:.||:||.|.||.:.|
 Worm   187 VEVKFKIK--------ELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTN 243

  Fly   263 RLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGE 327
            |:.|:::||.::..:.:..|..:|:|:||.|:...||:. .:|...||:||            |.
 Worm   244 RMIESMQLFNSICNSTWFLSTAMILFMNKKDLFMEKIQR-VNITTAFPDYE------------GG 295

  Fly   328 SDWTK--MFIKQKLVDITQEPFKRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILS 390
            .::.:  .|||||..::...|.|             :..|.|.|.||||..::.|...|...|:.
 Worm   296 QNYEEAVSFIKQKFAELNLNPDK-------------KTIYMHETCATDTNQVQLVISSVIDTIIQ 347

  Fly   391 ENVSSMGL 398
            :|:...|:
 Worm   348 KNLQKAGM 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 125/387 (32%)
G-alpha 48..392 CDD:206639 122/364 (34%)
odr-3NP_506290.1 G_alpha 14..354 CDD:214595 127/395 (32%)
G-alpha 34..350 CDD:206639 122/365 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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