DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gpa-13

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001256451.1 Gene:gpa-13 / 179746 WormBaseID:WBGene00001675 Length:402 Species:Caenorhabditis elegans


Alignment Length:344 Identity:101/344 - (29%)
Similarity:173/344 - (50%) Gaps:39/344 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHESILQLVGQMGVLGIDFGSC 112
            :::||||:|||||||:::|:|:|:...||:.|...:...||.||.:||..|...|.:..|.|...
 Worm    90 IRLLLLGSAESGKTTVLEQVRLLYKQHFTESEYFHRRAFIYHNIFKSIKALCRAMRMSDIQFADP 154

  Fly   113 TSERSADYILSLPGSAPEYMNEEYCDHVTTLWNDVGIRACYDRSNEFPLLDSAKYFLDNFVRISD 177
            .:...|..|::.........:::..:.:..:|||..::..|.|.::|.|.|||.|||:|..:|:.
 Worm   155 INMGRAQSIIADEHGHYGLFSKDLAEKIKHIWNDKSMQKLYARRSQFNLNDSASYFLNNIDKINM 219

  Fly   178 AEYIPSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAV 242
            .:|.||..|::.:...|.|:..:.|.        ...|.||::|:|||:..|.||...:|||.|:
 Worm   220 VDYKPSERDLIMAYVPTCGVQNVIFT--------ACNQSFQLFDIGGQKIDRRKWALQYEGIDAI 276

  Fly   243 LFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMERKIRAGKHIVD 307
            .|.|:.||:||.:.||...|||.:||.|.:::.::...|:..:.:|||:.|:...|:.. ..:..
 Worm   277 FFCIAISEYDQVMSEDMVTNRLDDALNLLQSISEDPAFATTPIYLFLNEIDVFCEKLSV-IPLSK 340

  Fly   308 YFPEYEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQEPFKRHSRNQVDLGTSERECY-YHFTVA 371
            |.|:::.           |:.|....|::....:.              ||..:|..| .:..:|
 Worm   341 YKPDFKG-----------GDQDDAIDFMENLACEA--------------LGKRDRSLYRVYRCIA 380

  Fly   372 TDTRCIRD----VFCDVQK 386
            .||:.:.:    ||.|:.|
 Worm   381 IDTQMMAELLSTVFKDIAK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 101/344 (29%)
G-alpha 48..392 CDD:206639 101/344 (29%)
gpa-13NP_001256451.1 MRP-S32 <13..>54 CDD:287214
G_alpha 70..397 CDD:214595 99/340 (29%)
G-alpha 90..401 CDD:206639 101/344 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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