DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gpa-1

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_505840.1 Gene:gpa-1 / 179546 WormBaseID:WBGene00001663 Length:357 Species:Caenorhabditis elegans


Alignment Length:364 Identity:119/364 - (32%)
Similarity:188/364 - (51%) Gaps:32/364 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DMAKGVRDTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHESILQLVGQM 102
            |.||...:..:|:||||..||||:|::|||:|:|.:||:.:|...|...:..|..:::..|:..|
 Worm    24 DKAKKTDENIIKLLLLGAGESGKSTVLKQMKIIHNSGFSQEEISNKRNVVCANTVQAMGALLDGM 88

  Fly   103 GVLGIDFGSCTSERSADYILSLPGSAPEY--MNEEYCDHVTTLWNDVGIRACYDRSNEFPLLDSA 165
            ..|..||.:.........|........||  .::...:.:|.||.|.|::..||:...|.|.|||
 Worm    89 KQLQFDFSTRVCNAHEKLIRETLNDKAEYGPFSDAMFNALTELWADKGVQCAYDKREFFYLHDSA 153

  Fly   166 KYFLDNFVRISDAEYIPSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQFQMYDVGGQRDQRN 230
            |||.|...|:....|:|:..||||:|..|.|:.::.|.:.        .:.|:::||||||.||.
 Worm   154 KYFFDAIARVHTPNYVPTENDILHTRVPTMGVIEVNFTIK--------GKFFRVFDVGGQRSQRK 210

  Fly   231 KWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIM 295
            |||..|:..:|::::.|.||:||.|.||.:.||:.|:::||:.|..|::..:..:|:||||.|:.
 Worm   211 KWIHCFDDAKAMIYVASLSEYDQVLLEDNTTNRMHESIQLFKQVINNKYFVNTSVILFLNKIDLF 275

  Fly   296 ERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQEPFKRHSRNQVDLGTS 360
            |.||...|..:..  .:|.| ..|.||             ....|...::.::..:.|:      
 Worm   276 EEKIVTKKRSLGI--AFESF-SGPSQD-------------LNAAVAFVEKKYRSMAENK------ 318

  Fly   361 ERECYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
            |:..|.|.|.||||:.::.|...|...|||..:...||:
 Worm   319 EKNIYCHHTCATDTQQVQYVLDAVLDTILSTKLKGCGLY 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 117/360 (33%)
G-alpha 48..392 CDD:206639 114/345 (33%)
gpa-1NP_505840.1 G_alpha 13..355 CDD:214595 117/360 (33%)
G-alpha 34..348 CDD:206639 112/343 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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