DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gpa-2

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_505157.1 Gene:gpa-2 / 179219 WormBaseID:WBGene00001664 Length:356 Species:Caenorhabditis elegans


Alignment Length:362 Identity:117/362 - (32%)
Similarity:190/362 - (52%) Gaps:43/362 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHESILQLVGQMGVLGIDF 109
            :.|||:||||..|.||:|::||||:|....:||:|...:...:|.||...:..||..|...|::|
 Worm    31 ERTVKLLLLGAGECGKSTVLKQMRLLTSKQYTDEELLTQAKLVYTNIVIEMDHLVKAMPAAGLNF 95

  Fly   110 GSCTSERSADYILSLPGSAPEYMN--EEYCDHVTTLWNDVGIRACYDRSNEFPLL---DSAKYFL 169
            .....|... ::|:|.....::.|  ::..|||..||.|..::..|....|..:.   |:.:||.
 Worm    96 SDPMREHDV-HMLTLYIKDMQHKNFQQDAADHVEKLWKDPVVKRLYAERKELNIRDIGDNTEYFF 159

  Fly   170 DNFVRISDAEYIPSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQ 234
            :|..|||..:|.|:..|.|..|..||||.::.|.:.        :.:|:::||||||.:|.|||.
 Worm   160 ENLPRISKEDYHPNATDTLLLRTKTTGIVEVGFEIK--------KVKFRVFDVGGQRSERKKWIH 216

  Fly   235 VFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMERKI 299
            .||.:.|::|:.:.||:::.|.||.:.||:.|:::||.::..:|:..:..:|:||||.|:.|.||
 Worm   217 CFEDVNAIIFIAALSEYNEVLFEDETTNRMIESMRLFESICNSRWFHNTNIILFLNKKDLFEEKI 281

  Fly   300 RAGKHIVDYFPEYEDFCKRPQQDNCFGESDW--TKMFIKQKLVDITQEPFKRHSRNQVDLGTSER 362
            :. ::|...||||.            ||.::  |..|||.|...::..|              ::
 Worm   282 KK-ENIHKAFPEYR------------GEQNYAETVAFIKTKFEALSNNP--------------KK 319

  Fly   363 ECYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
            ..|.|.|.||||..::.:...|..||:..|:...||:
 Worm   320 TFYVHETCATDTNQVQKILDSVISMIIQSNLHKSGLY 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 115/358 (32%)
G-alpha 48..392 CDD:206639 113/350 (32%)
gpa-2NP_505157.1 G_alpha 13..354 CDD:214595 115/358 (32%)
G-alpha 34..350 CDD:206639 113/351 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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