DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gpa-10

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_504745.1 Gene:gpa-10 / 179075 WormBaseID:WBGene00001672 Length:356 Species:Caenorhabditis elegans


Alignment Length:399 Identity:121/399 - (30%)
Similarity:184/399 - (46%) Gaps:70/399 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VMTHK-EDQYPVSLDHHVLKDMAKGVR-DTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERR 81
            |:|.: :||..|:.:.....:..|.:: :.||  ||||..||||:|::||||.:..| :|..|..
 Worm     8 VLTDEMKDQIKVNKEIEKQLEKKKNMQLEQTV--LLLGPGESGKSTVMKQMRAMTGN-YTKTELH 69

  Fly    82 EKIPEIYQNIHESILQLVGQMGVLGIDFGSCTSERSADYILSLPGSAPE---------------- 130
            |:...|.||:               ..|.....|...:|||.:.....:                
 Worm    70 ERKVLIIQNL---------------CQFSEMLLEYVREYILEMTEDDDKRYTVMCEELKMAVIHD 119

  Fly   131 -YMNEEYCDHVTTLWNDVGIRACYDRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKIT 194
             .|..|..|.:...|.:..|:..|.:.:.|.|.||||||.||..||....:.|:.:||:|.|..|
 Worm   120 GIMRPELADTLKEFWGNSAIQDAYSKRDTFHLTDSAKYFFDNIDRIKLPGFEPTNQDIVHIRVPT 184

  Fly   195 TGISQITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDP 259
            ||::|:...:...|.|        :.|.||||.:|.||...|:...||||:.:.|||||.|.||.
 Worm   185 TGVAQVEVIMNNIKLM--------ICDCGGQRSERRKWYHFFDEADAVLFVAAISEFDQKLAEDE 241

  Fly   260 SQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNC 324
            ..||:.|:::||..|:..:|...|.:|:||||.|:.|.|::..| |.||||::|         ..
 Worm   242 ETNRMHESIRLFWTVFNGKFFKKAAVILFLNKIDLFEEKVKHVK-IKDYFPKFE---------GA 296

  Fly   325 FGESDWTKMFIKQKLVDITQEPFKRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMIL 389
            ...|:.||.|.:|....|..: ||             :..|.|.|.|...: ::.:...|...::
 Worm   297 NTVSEGTKFFRRQFREGIHPD-FK-------------KRMYTHETCAISDQ-VQIIINTVIDTVI 346

  Fly   390 SENVSSMGL 398
            .:|:...|:
 Worm   347 QDNLKDTGM 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 115/384 (30%)
G-alpha 48..392 CDD:206639 112/360 (31%)
gpa-10NP_504745.1 G_alpha 17..354 CDD:214595 116/387 (30%)
G-alpha 39..350 CDD:206639 112/361 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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