DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and gpa-4

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_499921.2 Gene:gpa-4 / 176865 WormBaseID:WBGene00001666 Length:359 Species:Caenorhabditis elegans


Alignment Length:376 Identity:129/376 - (34%)
Similarity:199/376 - (52%) Gaps:41/376 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHESI 95
            :|..:..|..:.|.:  :|:||||..||||:||::||||||..||...|:....|.::.|:.:|:
 Worm    18 IDEQLRHDHERCVGE--IKLLLLGAGESGKSTIVRQMRILHETGFNKQEQMAYRPVVFSNMVQSM 80

  Fly    96 LQLVGQMGVLGIDFGSCTSERSADYILS-----LPGSAPEYMNEEYCDHVTTLWNDVGIRACYDR 155
            |.::..|..|.|.|.....|..|...:|     ......|..:.|..|.:..||.|.|::.|..|
 Worm    81 LAILKAMQPLNISFTDAAREEDARMFISHFLHVNNAELSEAFSLELSDLMKQLWMDEGVKKCVKR 145

  Fly   156 SNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQFQMY 220
            ::|:.|.|||:|:.:...|||.:.|:|:.:|||.:|..:|||.:.||...        :..|:|:
 Worm   146 AHEYQLNDSAEYYFNALDRISSSSYLPTQDDILRARVKSTGIVETTFMYK--------DLCFKMF 202

  Fly   221 DVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGL 285
            ||||||.:|.|||..|:.:.||:|.::.||:|..|.||.:.||:.|:::||.::..|.:.....:
 Worm   203 DVGGQRSERKKWIHCFDSVTAVIFCVALSEYDLRLAEDQTMNRMHESMQLFDSIVNNCWFTETSI 267

  Fly   286 IVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQK--LVDITQEPFK 348
            |:||||.||.|.:||.....| .||||:......:          |..||:.:  :::..|.|  
 Worm   268 ILFLNKMDIFEERIRYTPLTV-CFPEYQGGMTITE----------TSTFIQSRFEILNKRQTP-- 319

  Fly   349 RHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
                       :::|.|.|||.||||..||.||..|..:|:..|:...||:
 Worm   320 -----------AQKEIYSHFTCATDTNNIRFVFDAVTDIIIRNNLYLCGLY 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 127/372 (34%)
G-alpha 48..392 CDD:206639 123/350 (35%)
gpa-4NP_499921.2 G_alpha 12..357 CDD:214595 127/372 (34%)
G-alpha 33..353 CDD:206639 123/351 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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