DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and goa-1

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_492108.1 Gene:goa-1 / 172505 WormBaseID:WBGene00001648 Length:354 Species:Caenorhabditis elegans


Alignment Length:375 Identity:132/375 - (35%)
Similarity:214/375 - (57%) Gaps:45/375 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHESI 95
            ::.::.:|..:..:|  :|:||||..||||:||:|||:|:|.:|||.::.::..|.:|.|..:|:
 Worm    19 IEKNLKEDGMQAAKD--IKLLLLGAGESGKSTIVKQMKIIHESGFTAEDYKQYKPVVYSNTVQSL 81

  Fly    96 LQLVGQMGVLGIDFGSCTSERSA----DYILSLPGSAPEYMNEEYCDHVTTLWNDVGIRACYDRS 156
            :.::..|..||:.|||...|..|    |.:..:..:.|  .:||....:..||.|.|::.|:.||
 Worm    82 VAILRAMSNLGVSFGSADREVDAKLVMDVVARMEDTEP--FSEELLSSMKRLWGDAGVQDCFSRS 144

  Fly   157 NEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQFQMYD 221
            ||:.|.||||||||:..|:.:|.|.|:.:|||.:|..||||.::.|..   |::     .|:::|
 Worm   145 NEYQLNDSAKYFLDDLERLGEAIYQPTEQDILRTRVKTTGIVEVHFTF---KNL-----NFKLFD 201

  Fly   222 VGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLI 286
            |||||.:|.|||..||.:.|::|.::.||:||.|.||.:.||:.|:||||.::..|::.....:|
 Worm   202 VGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMHESLKLFDSICNNKWFTDTSII 266

  Fly   287 VFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDW--TKMFIKQKLVDITQEPFKR 349
            :||||.|:.|.||:... :...||||.            |..|:  ...:|:.:.          
 Worm   267 LFLNKKDLFEEKIKKSP-LTICFPEYS------------GRQDYHEASAYIQAQF---------- 308

  Fly   350 HSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
            .::|:    ::.:|.|.|.|.||||..|:.||..|..:|::.|:...||:
 Worm   309 EAKNK----SANKEIYCHMTCATDTTNIQFVFDAVTDVIIANNLRGCGLY 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 130/371 (35%)
G-alpha 48..392 CDD:206639 127/349 (36%)
goa-1NP_492108.1 G_alpha 14..352 CDD:214595 130/371 (35%)
G-alpha 34..348 CDD:206639 127/350 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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