DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and Gnao1

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001106855.1 Gene:Gnao1 / 14681 MGIID:95775 Length:354 Species:Mus musculus


Alignment Length:376 Identity:129/376 - (34%)
Similarity:209/376 - (55%) Gaps:45/376 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SLDHHVLKDMAKGVRDTTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHES 94
            :::.::.:|.....:|  ||:||||..||||:||:|||:|:|.:||:.::.::..|.:|.|..:|
Mouse    18 AIEKNLKEDGISAAKD--VKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQS 80

  Fly    95 ILQLVGQMGVLGIDFG----SCTSERSADYILSLPGSAPEYMNEEYCDHVTTLWNDVGIRACYDR 155
            :..:|..|..||:::|    ...|:...|.:..:..:.|  .:.|....:..||.|.||:.|::|
Mouse    81 LAAIVRAMDTLGVEYGDKERKTDSKMVCDVVSRMEDTEP--FSAELLSAMMRLWGDSGIQECFNR 143

  Fly   156 SNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGI--SQITFRVPIPKSMGGGEQQFQ 218
            |.|:.|.|||||:||:..||...:|.|:.:|||.:|..||||  :..||:          ...|:
Mouse   144 SREYQLNDSAKYYLDSLDRIGAGDYQPTEQDILRTRVKTTGIVETHFTFK----------NLHFR 198

  Fly   219 MYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASA 283
            ::||||||.:|.|||..||.:.|::|.::.|.:||.|.||.:.||:.|:||||.::..|::....
Mouse   199 LFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLKLFDSICNNKWFTDT 263

  Fly   284 GLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQEPFK 348
            .:|:||||.||.|.||:... :...||||.            |.|.:|:.        :.....:
Mouse   264 SIILFLNKKDIFEEKIKKSP-LTICFPEYT------------GPSAFTEA--------VAHIQGQ 307

  Fly   349 RHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
            ..|:|:    ::.:|.|.|.|.||||..|:.||..|..:|:::|:...||:
Mouse   308 YESKNK----SAHKEVYSHVTCATDTNNIQFVFDAVTDVIIAKNLRGCGLY 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 127/372 (34%)
G-alpha 48..392 CDD:206639 124/349 (36%)
Gnao1NP_001106855.1 G_alpha 14..352 CDD:214595 127/372 (34%)
G-alpha 34..348 CDD:206639 124/350 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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