DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphaf and Gna13

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_034433.3 Gene:Gna13 / 14674 MGIID:95768 Length:377 Species:Mus musculus


Alignment Length:398 Identity:144/398 - (36%)
Similarity:212/398 - (53%) Gaps:52/398 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PAAVMTHKEDQYPVSLDHHVLKDMAKGV-RDTT-----VKILLLGTAESGKTTIIKQMRILHING 74
            |..|:|:.|.:     .....|::.|.: |:.|     |||||||..||||:|.:|||||:|...
Mouse    16 PGCVLTNGEAE-----QQRKSKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQD 75

  Fly    75 FTDDERREKIPEIYQNIHESILQLVGQMGVLGIDFGSCTSERSADYILSLPGSAP---EYMNE-- 134
            |....|.|..|.||.|:.:.:..||.....|.|.:|...::...|.:::....||   :.|.|  
Mouse    76 FDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNKNQLHGDKLMAFDTRAPMAAQGMVETR 140

  Fly   135 ---EYCDHVTTLWNDVGIRACYDRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTG 196
               :|...:..||.|.||:..|||..||.|.:|.||||||..::...:||||.:|||.:|:.|.|
Mouse   141 VFLQYLPAIRALWEDSGIQNAYDRRREFQLGESVKYFLDNLDKLGVPDYIPSQQDILLARRPTKG 205

  Fly   197 ISQITFRVP-IPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPS 260
            |.:..|.:. :|         |:|.||||||.:|.:|.:.|:.:.::|||:|.|||||.|.||..
Mouse   206 IHEYDFEIKNVP---------FKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQ 261

  Fly   261 QNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCF 325
            .|||.|:|.:|..:..||..::..:|:||||.|::|.|::. ..|.|||.|:|.      ..:|.
Mouse   262 TNRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQV-VSIKDYFLEFEG------DPHCL 319

  Fly   326 GESDWTKMFIKQKLVDITQEPFKRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILS 390
            .:       :::.||    |.|:...|:|     .:|..|:|||.|.:|..||.||.||:..||.
Mouse   320 RD-------VQKFLV----ECFRGKRRDQ-----QQRPLYHHFTTAINTENIRLVFRDVKDTILH 368

  Fly   391 ENVSSMGL 398
            :|:..:.|
Mouse   369 DNLKQLML 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 139/381 (36%)
G-alpha 48..392 CDD:206639 134/352 (38%)
Gna13NP_034433.3 G_alpha 29..375 CDD:214595 139/377 (37%)
G-alpha 49..371 CDD:206639 134/353 (38%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 50..63 10/12 (83%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 195..203 4/7 (57%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 218..227 6/8 (75%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 287..294 5/6 (83%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 347..352 2/4 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841817
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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