DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphaf and gnat2

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_571944.1 Gene:gnat2 / 140429 ZFINID:ZDB-GENE-011128-10 Length:354 Species:Danio rerio


Alignment Length:377 Identity:135/377 - (35%)
Similarity:208/377 - (55%) Gaps:46/377 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KDMAKGVRD-------------TTVKILLLGTAESGKTTIIKQMRILHINGFTDDERREKIPEIY 88
            |:|||..::             .|||:||||..||||:||:|||:|||..|:|.:|:.|....|:
Zfish    10 KEMAKKSKELEKQLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKILHQGGYTKEEQMEFRSIIF 74

  Fly    89 QNIHESILQLVGQMGVLGIDFGSCTSERSADYILSLPGSAPE-YMNEEYCDHVTTLWNDVGIRAC 152
            .||.:|.|.::..|.:|.|:|||.:::..:..:.:|..|..| .|..|..|.:..||.|.|::|.
Zfish    75 GNILQSALAIIRGMEMLSINFGSPSAQEDSQKLQNLSDSIEEGTMPPELADVIKRLWKDAGVQAS 139

  Fly   153 YDRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQF 217
            :||:.|:.|.|||.|:|:...||...:|:|:.:|:|.||..||||        |.:..|..|..|
Zfish   140 FDRAAEYQLNDSAGYYLNEMDRICKPDYLPTEQDVLRSRVKTTGI--------IEEQFGCKELHF 196

  Fly   218 QMYDVGGQRDQRNKWIQVFEGIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLAS 282
            :|:||||||.:|.|||..|||:..::|..:.|.:|..|.||...||:.|:|.||.::..:||.|:
Zfish   197 RMFDVGGQRSERKKWIHCFEGVTCIIFCGALSAYDMVLVEDDEVNRMHESLHLFNSICNHRFFAT 261

  Fly   283 AGLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQEPF 347
            ..:::||||.|:.:.||:. .|:...||:|:.       .|.:.::   ..:||.:..|:     
Zfish   262 TSIVLFLNKKDLFQEKIKK-VHLSICFPDYDG-------PNTYEDA---SNYIKTQFQDL----- 310

  Fly   348 KRHSRNQVDLGTSERECYYHFTVATDTRCIRDVFCDVQKMILSENVSSMGLF 399
                    ::....:|.|.|.|.||||:.:..||..|..:|:.||:...|||
Zfish   311 --------NMKKGVKEIYSHMTCATDTKNVEIVFNAVTDIIIKENLKDCGLF 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 132/373 (35%)
G-alpha 48..392 CDD:206639 125/344 (36%)
gnat2NP_571944.1 G_alpha 13..352 CDD:214595 130/370 (35%)
G-alpha 34..348 CDD:206639 126/345 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586254
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.