DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and vwa1

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_002938896.1 Gene:vwa1 / 100485693 XenbaseID:XB-GENE-956807 Length:496 Species:Xenopus tropicalis


Alignment Length:396 Identity:82/396 - (20%)
Similarity:134/396 - (33%) Gaps:149/396 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LGTAESGKT-TIIKQMRILHINGFTDDER---REKIPEIYQNIHESI--------LQLVGQMGVL 105
            :|...:||. :.||:      |.|  |||   |.::|::...:.:.:        :||:..|||.
 Frog   110 MGDTNTGKALSYIKE------NLF--DERSGSRAEVPKVMVWVTDGLSTDDISQPMQLLKDMGVT 166

  Fly   106 GIDFGSCTSERSADYI-LSLPGSAPEYMNEEYCD----HVTT--LWNDV--GIRACYDRSNE--- 158
            ..    ..|....:|: ||...|.|...:..:.|    |:.|  |.:.:  .|||....:.:   
 Frog   167 VF----IVSTGRGNYLELSAAASTPSDTHLHFVDVDDLHIITKELRDSIIELIRARRLHAQDITT 227

  Fly   159 ------FPLLDSAK--YFLDNFVRISDAE------------------------------------ 179
                  :|.|.|.:  |:|..:..:||.|                                    
 Frog   228 TSFRLTWPRLLSKETGYYLLEYELVSDPERKFSRTLSGDQTSFTLQNLTPDTAYRVTLLPESNLQ 292

  Fly   180 YI-PST-------EDILHSRKITTGISQITFRV---PIPKSMGGGEQQF--------QMYDVGGQ 225
            || |.|       |.|..:|.:.:..|..:|||   |...|:.|.|.|:        |..||...
 Frog   293 YIQPQTIQVSTLPEMISPTRILISEPSTHSFRVSWGPTLDSVAGYEIQYGPLPSNIVQTVDVDSS 357

  Fly   226 RDQRNKWIQVFEGIQA------------------VLFLISCSEFDQNLREDPSQNRLQE-ALKLF 271
            ::.     .|.|.:|:                  .|..|:|:|.:.|:|    ..||:| .....
 Frog   358 QNS-----TVLENLQSNTTYLVTVAALYKSGGEKALSAIACTEENDNIR----YLRLEELGSDKV 413

  Fly   272 RAVW--------------QNRFLASAGLIVFLNKYDIMERKIRAGKHIVDYFPEYEDFCKRPQQD 322
            :|.|              |.:..:|:.:||......::...|.||        ...:.|..|...
 Frog   414 KATWSTTEGEVQGYLIKCQRQAGSSSEVIVGPQTQSVILNDIEAG--------TTSEICVMPVYG 470

  Fly   323 NCFGES 328
            |..|::
 Frog   471 NGAGKN 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 82/396 (21%)
G-alpha 48..392 CDD:206639 82/396 (21%)
vwa1XP_002938896.1 vWA_collagen 36..196 CDD:238749 23/97 (24%)
fn3 218..285 CDD:365830 8/66 (12%)
FN3 310..394 CDD:238020 18/88 (20%)
fn3 398..475 CDD:365830 17/88 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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