DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphaf and si:ch211-207c7.2

DIOPT Version :9

Sequence 1:NP_524118.1 Gene:Galphaf / 39861 FlyBaseID:FBgn0010223 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_003201106.1 Gene:si:ch211-207c7.2 / 100034591 ZFINID:ZDB-GENE-050208-540 Length:302 Species:Danio rerio


Alignment Length:332 Identity:91/332 - (27%)
Similarity:152/332 - (45%) Gaps:65/332 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 AESGKTTIIKQMRILHINGFTDDERREKIPEIYQNIHESILQLVGQMGVLGIDFGSCTSERSADY 120
            :::.|..|.|...|  ...|.:..:||:        .|..|.::.|..:....|.:..|.:..:.
Zfish    15 SKNKKNAIAKNKEI--DLSFIEQRKRER--------REIKLLVIDQWQIYAQQFQNQDSHQITEL 69

  Fly   121 ILSLPGSAPEYMNEEYCDHVTTLWNDVGIRACY----DRSNEFPLLDSAKYFLDNFVRISDAEYI 181
            :             .:.:.:..||.|.|.:.|:    |....   |.|.:||:|...:|:...||
Zfish    70 L-------------SFVEPIRHLWADEGFKNCFKLCKDNHRH---LTSLEYFVDRLEQITANNYI 118

  Fly   182 PSTEDILHSRKITTGISQITFRVPIPKSMGGGEQQFQMYDVGGQRDQRNKWIQVFEGIQAVLFLI 246
            |.|.||..:...|.||:::|  :|:      ....|:.::|.|||.||.|||..||.:..|:|:.
Zfish   119 PITADIFRTHSPTNGIAELT--IPM------NSVTFRFFNVSGQRGQRKKWIHHFENVTTVIFVA 175

  Fly   247 SCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMERKIRAGKHIVDYFPE 311
            |.||:|:.|.|: ::||::|:|.||.:|..:.:.|.:.:::.|||.||:.|||:. .|:..:|||
Zfish   176 SLSEYDEFLEEN-NKNRMEESLPLFNSVTHSPWFAQSFILLLLNKKDILARKIQF-SHLKTFFPE 238

  Fly   312 YEDFCKRPQQDNCFGESDWTKMFIKQKLVDITQEPFKRHSRNQVDLGTSERECYYHFTVATDTR- 375
            :|        .|.....|..|..:|....:.|.:|:.          .|:..|...|   |||| 
Zfish   239 FE--------GNIQNTDDAMKFMLKSYERNATPDPWI----------YSQFICVKDF---TDTRI 282

  Fly   376 ---CIRD 379
               |::|
Zfish   283 IFECVKD 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphafNP_524118.1 G_alpha 30..397 CDD:214595 91/332 (27%)
G-alpha 48..392 CDD:206639 91/332 (27%)
si:ch211-207c7.2XP_003201106.1 G_alpha 22..296 CDD:214595 90/325 (28%)
G-alpha <71..295 CDD:206639 79/253 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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