DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Baldspot and Elovl1

DIOPT Version :10

Sequence 1:NP_648909.1 Gene:Baldspot / 39860 FlyBaseID:FBgn0260960 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001037740.1 Gene:Elovl1 / 679532 RGDID:1587151 Length:279 Species:Rattus norvegicus


Alignment Length:282 Identity:79/282 - (28%)
Similarity:126/282 - (44%) Gaps:73/282 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TWVFYYCGIYMLVIFGGQHFMQNRPRFQLRGPLIIWNTLLAMFSIMGAARTAPELIHVLRHYGLF 100
            |:|::       |:..|...|.||..|||||.:|::|..|...|:.        :::.....|..
  Rat    37 TYVYF-------VLSLGPRIMANRKPFQLRGFMIVYNFSLVTLSLY--------IVYEFLMSGWL 86

  Fly   101 HSV---C-------VPSYIEQDRVCGFWTWLFVLSKLPELGDTIFIVLRKQ--PLIFLHWYHHIT 153
            .:.   |       .|..:...||    .|||:|||:.||.||:..:|||:  .:.|||.:|| :
  Rat    87 STYTWRCDPVDFSNNPEALRMVRV----AWLFMLSKVIELMDTVIFILRKKDGQVTFLHVFHH-S 146

  Fly   154 VLIYSWFSYTEYTSSARWFI------------VMNYCVHSVMYSYYALKAAR--FNPPRFISMII 204
            ||.:||:          |.|            ::|..||.|||.||.|.|..  ..|..:....:
  Rat   147 VLPWSWW----------WGIKIAPGGMGSFHAMINSSVHVVMYLYYGLSALGPVAQPYLWWKKHM 201

  Fly   205 TSLQLAQMIIGCAINVWANGFLKTHGTSSCHISQRNINLSIAMYSS-YFVLFARFFYKAYLAPGG 268
            |::||.|.:: .::::....|:     .||:.....|...|.||.: :|:||:.|:|.:|.    
  Rat   202 TAIQLIQFVL-VSLHISQYYFM-----PSCNYQYPIIIHLIWMYGTIFFILFSNFWYHSYT---- 256

  Fly   269 HKSRRMAASL-----AAQNVVK 285
             |.:|:..::     ||...||
  Rat   257 -KGKRLPRAVQQNGAAASMKVK 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaldspotNP_648909.1 ELO 30..271 CDD:460083 73/261 (28%)
Elovl1NP_001037740.1 ELO 23..262 CDD:460083 75/265 (28%)

Return to query results.
Submit another query.