DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Baldspot and elovl2

DIOPT Version :9

Sequence 1:NP_648909.1 Gene:Baldspot / 39860 FlyBaseID:FBgn0260960 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001016159.1 Gene:elovl2 / 548913 XenbaseID:XB-GENE-489753 Length:296 Species:Xenopus tropicalis


Alignment Length:280 Identity:81/280 - (28%)
Similarity:123/280 - (43%) Gaps:49/280 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MDISVTPNYSYIFDFENDFIHQRTRKW-MLENWTWVFYYCGIYMLVIFGGQHFMQNRPRFQLRGP 67
            :|..|.....|:|...:    .|||.| ||:::....:...:|.|.|:.|..:|||||.|.|||.
 Frog     7 IDQEVNAFVDYLFGPRD----TRTRGWLMLDSYLPTLFLTLLYFLSIWLGTKYMQNRPAFSLRGH 67

  Fly    68 LIIWN---TLLAMFSIMGAARTAPELIHVLRHYGLFHSVC--VPSYIEQDRVCGFWTWLFVLSKL 127
            ||::|   |||:::.::       ||| :....|.::..|  :.|..:.|.......|.:..||.
 Frog    68 LIVYNLVVTLLSLYMLI-------ELI-LSTWEGGYNLQCQNLDSAGKADVRVAKVLWWYYFSKA 124

  Fly   128 PELGDTIFIVLRKQ--PLIFLHWYHHITVLIYSWFSYTEYTSSARWFI--VMNYCVHSVMYSYYA 188
            .|..||||.||||:  .:.|||.|||.: :...|:....:....:.|.  .:|..:|.:|||||.
 Frog   125 IEFMDTIFFVLRKKNSQITFLHVYHHAS-MFNIWWCVLNWIPCGQSFFGPTLNSFIHVLMYSYYG 188

  Fly   189 LKAARFNPPRFISMI-----ITSLQLAQMIIGCAINVWANGFLKTHGTSSCHISQRNINLSIAMY 248
            |...    |.....:     :|..||.|.::..           || |.|..:..........|:
 Frog   189 LSVI----PSMHKYLWWKRYLTQAQLVQFLLTI-----------TH-TLSAAVKPCGFPFGCLMF 237

  Fly   249 -SSYF----VLFARFFYKAY 263
             :||.    :||..|:.|.|
 Frog   238 QASYMATLVILFVNFYLKTY 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaldspotNP_648909.1 ELO 30..271 CDD:395916 74/254 (29%)
elovl2NP_001016159.1 ELO 49..263 CDD:366492 69/234 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.