DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Baldspot and elovl1a

DIOPT Version :10

Sequence 1:NP_648909.1 Gene:Baldspot / 39860 FlyBaseID:FBgn0260960 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001005989.1 Gene:elovl1a / 449816 ZFINID:ZDB-GENE-041010-66 Length:315 Species:Danio rerio


Alignment Length:269 Identity:76/269 - (28%)
Similarity:118/269 - (43%) Gaps:66/269 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FYYCGIYMLVIFGGQHFMQNRPRFQLRGPLIIWNTLLAMFS--------IMGAARTAPELIHVLR 95
            |...|....|::.|..:|.:|..|:|...:|.:|..:..|:        :.|.|.|         
Zfish    38 FILLGYVFSVLYVGPRYMASRKPFRLNTAMIAYNFFMVAFNAYTVYEFLMSGWATT--------- 93

  Fly    96 HYGLFHSVCVPSYIEQDRVCGFWTWLFVLSKLPELGDTIFIVLRKQ--PLIFLHWYHHITVLIYS 158
             |.....:|.||...|........|||..||..||.||:|.||||:  .:.|||.:|| :||.::
Zfish    94 -YTWRCDLCDPSSSPQALRMVRAAWLFYFSKYIELLDTVFFVLRKKHSQVTFLHIFHH-SVLPWT 156

  Fly   159 WF---SYTEYTSSARWFIVMNYCVHSVMYSYYALKAARFNPPRFISMI-----ITSLQLAQMIIG 215
            |:   :.|.......:..::|.|||.:||:||.|.||   .|||...:     :|::||.|.:: 
Zfish   157 WWWGITLTPAGGMGSFHALVNACVHVIMYTYYGLAAA---GPRFQKYLWWKKYMTAIQLIQFVL- 217

  Fly   216 CAINVWANGFLKTHGTSSCHISQRN------------INLSIAMYSSYFVLFARFFYKAYLAPGG 268
                  ..|          ||||..            |:|.:...:.:|:||:.|:.:||:    
Zfish   218 ------VTG----------HISQYYFMEKCDYQVPIFIHLILIYGTFFFILFSNFWIQAYI---- 262

  Fly   269 HKSRRMAAS 277
             |.:|:..|
Zfish   263 -KGKRLPVS 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaldspotNP_648909.1 ELO 30..271 CDD:460083 73/261 (28%)
elovl1aNP_001005989.1 ELO 28..268 CDD:460083 75/265 (28%)

Return to query results.
Submit another query.