DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mo25 and pde4c

DIOPT Version :9

Sequence 1:NP_001261958.1 Gene:Mo25 / 39858 FlyBaseID:FBgn0017572 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_004911040.1 Gene:pde4c / 100380081 XenbaseID:XB-GENE-1002336 Length:801 Species:Xenopus tropicalis


Alignment Length:332 Identity:70/332 - (21%)
Similarity:125/332 - (37%) Gaps:74/332 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLFGKSQKSPVELVKSLKEAINALEAGDRKVEKAQEDVSKNLVSIKNMLYGSSDA----EPPAD 61
            :|.||...:..|.|.|.: |.||.......||  |:...::.|..|...::...|.    ..|.|
 Frog   314 IPRFGVKTEQEVPLAKEV-ENINKWGLDIFKV--AEYSGNRPLTVIMYSIFQERDLLKTFHIPVD 375

  Fly    62 YVVAQLS--QELYNSNLLLLLIQNLHRIDFEGKKHVALIFNNVLRRQIGTRSPTVEYICTKPEIL 124
            ..:..:.  ::.|:|:  :....|:|..|.....||.|            .:|.:|.:.|..||:
 Frog   376 TFITYMMTLEDHYHSD--VAYHNNIHAADVAQSTHVLL------------STPALEAVFTDLEIM 426

  Fly   125 FTLMAG--YEDAHPEIA----LNSGTMLRECARYEALAKIMLHSDEFFKFFRYVEVSTFDIASDA 183
            ..:.|.  ::..||.::    :|:.:.|  ...|...:  :|.:......|:.::....||..:.
 Frog   427 AAIFASAIHDVDHPGVSNQFLINTNSEL--ALMYNDAS--VLENHHLAVGFKLLQEENCDIFQNL 487

  Fly   184 FSTFKELLTRHKLLCAEFLDANYDKFFSQHYQRLLNSENYVTRRQSLKLLGELLLDRHNFTVMTR 248
              |.|:..|..|::....|..:..|     :..||.....:...:.:..||.||||.::      
 Frog   488 --TKKQRQTLRKMVIDMVLATDMSK-----HMNLLADLKTMVETKKVTSLGVLLLDNYS------ 539

  Fly   249 YISEPENLKLMMNMLKEKSRNIQFEAFHVFKVFVANPNKPKPILDILLRNQTK--LVDFLTNFHT 311
                 :.::::.||              |....::||.||..|    .|..|.  :|:|   ||.
 Frog   540 -----DRIQVLQNM--------------VHCADLSNPTKPLEI----YRQWTDRIIVEF---FHQ 578

  Fly   312 DRSEDEQ 318
            ...|.|:
 Frog   579 GDREREK 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mo25NP_001261958.1 Mo25 3..334 CDD:400746 69/330 (21%)
pde4cXP_004911040.1 PDEase_I 394..635 CDD:278654 51/247 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165166670
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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