DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta6 and PBF1

DIOPT Version :9

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001030905.1 Gene:PBF1 / 825253 AraportID:AT3G60820 Length:223 Species:Arabidopsis thaliana


Alignment Length:221 Identity:100/221 - (45%)
Similarity:145/221 - (65%) Gaps:4/221 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTL 82
            :|.::|||::|||:.|||||.|:.|||||||:|:||:|.||..||:.||:.:.||.|:|..||..
plant     4 QHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVK 68

  Fly    83 SLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPI 147
            :|...:|.|...|:|.|.:.|:..|:||:||..:|.:||||||..|:|.|:|.||||.|::||.:
plant    69 ALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAV 133

  Fly   148 GHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNL---EDADKIKLTKERAVSVASDTFISAAERDI 209
            |..|:..|.|.|:..||:.|.||||:...:..|   :|:: ..|::..||.:....|.||.||||
plant   134 GSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSN-TPLSEAEAVDLVKTVFASATERDI 197

  Fly   210 YTGDSVLINIITKDGIEVRTLTLRQD 235
            ||.:.:.|.|:..|||:...:.||:|
plant   198 YTVNKLEIMILKADGIKTELMDLRKD 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 98/215 (46%)
PRE1 24..225 CDD:223711 93/203 (46%)
PBF1NP_001030905.1 proteasome_beta_type_1 8..223 CDD:239726 98/215 (46%)
PRE1 10..219 CDD:223711 95/209 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 173 1.000 Domainoid score I1135
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2087
Inparanoid 1 1.050 197 1.000 Inparanoid score I1335
OMA 1 1.010 - - QHG54193
OrthoDB 1 1.010 - - D1092660at2759
OrthoFinder 1 1.000 - - FOG0004805
OrthoInspector 1 1.000 - - oto3412
orthoMCL 1 0.900 - - OOG6_101631
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3385
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

Return to query results.
Submit another query.