DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and PAD1

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_190694.1 Gene:PAD1 / 824289 AraportID:AT3G51260 Length:250 Species:Arabidopsis thaliana


Alignment Length:212 Identity:47/212 - (22%)
Similarity:79/212 - (37%) Gaps:39/212 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQ 93
            |.:.|.:.|.|..|:|.:.: |:.....||:..|:..|.....|..||..||...|....::..|
plant    30 GNAAVGVRGTDTVVLAVEKK-STPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQ 93

  Fly    94 SYEHTHLRTMTTEAVAQMLSIAMYNRRFF------PYYVSNILAGIDNEGK-GVVYSYDPIGHCE 151
            |:..|....:|.|.:.:.  ||...:::.      |:.:|.::.|.|...: ..:|..||.|...
plant    94 SHRLTLEDPVTVEYITRY--IAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFS 156

  Fly   152 KATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVL 216
            .....|.|.....::..|:     ||.           ||           ||.:..:......|
plant   157 AWKANATGRNSNSIREFLE-----KNY-----------KE-----------SAGQETVKLAIRAL 194

  Fly   217 INIITKDG--IEVRTLT 231
            :.::...|  |||..:|
plant   195 LEVVESGGKNIEVAVMT 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 47/212 (22%)
PAD1NP_190694.1 proteasome_alpha_type_7 4..210 CDD:239724 46/209 (22%)

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